BLASTX nr result

ID: Scutellaria23_contig00033600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033600
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27699.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat...   119   3e-25
emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]   119   3e-25
ref|XP_002518010.1| pentatricopeptide repeat-containing protein,...   116   2e-24
ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat...   111   7e-23

>emb|CBI27699.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/79 (67%), Positives = 64/79 (81%)
 Frame = -2

Query: 238 SILPVCGQLASVDLLRQCHGYIVRACFEDAYLKAALLDVYSKCGSLNSAYKLYQSTPQKD 59
           SILP C  +ASV +LRQCHGY++RACF D  L  A +D+YSKCGS+  AYKL+ S+PQKD
Sbjct: 531 SILPACAHMASVHMLRQCHGYVIRACFNDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKD 590

Query: 58  LVGITAMLGGFAMHGMGKE 2
           LV  TAM+GGFAMHGMG+E
Sbjct: 591 LVMFTAMVGGFAMHGMGEE 609


>ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Vitis vinifera]
          Length = 868

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/79 (67%), Positives = 64/79 (81%)
 Frame = -2

Query: 238 SILPVCGQLASVDLLRQCHGYIVRACFEDAYLKAALLDVYSKCGSLNSAYKLYQSTPQKD 59
           SILP C  +ASV +LRQCHGY++RACF D  L  A +D+YSKCGS+  AYKL+ S+PQKD
Sbjct: 592 SILPACAHMASVHMLRQCHGYVIRACFNDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKD 651

Query: 58  LVGITAMLGGFAMHGMGKE 2
           LV  TAM+GGFAMHGMG+E
Sbjct: 652 LVMFTAMVGGFAMHGMGEE 670


>emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/79 (67%), Positives = 64/79 (81%)
 Frame = -2

Query: 238  SILPVCGQLASVDLLRQCHGYIVRACFEDAYLKAALLDVYSKCGSLNSAYKLYQSTPQKD 59
            SILP C  +ASV +LRQCHGY++RACF D  L  A +D+YSKCGS+  AYKL+ S+PQKD
Sbjct: 1524 SILPACAHMASVHMLRQCHGYVIRACFNDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKD 1583

Query: 58   LVGITAMLGGFAMHGMGKE 2
            LV  TAM+GGFAMHGMG+E
Sbjct: 1584 LVMFTAMVGGFAMHGMGEE 1602


>ref|XP_002518010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542992|gb|EEF44528.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 824

 Score =  116 bits (291), Expect = 2e-24
 Identities = 50/79 (63%), Positives = 66/79 (83%)
 Frame = -2

Query: 238 SILPVCGQLASVDLLRQCHGYIVRACFEDAYLKAALLDVYSKCGSLNSAYKLYQSTPQKD 59
           S+LP C Q ASV L++QCHGY++RACF+DA+L+ ALLD+Y+KCG L  A+KL+ S P +D
Sbjct: 528 SLLPSCAQTASVHLMKQCHGYVIRACFDDAHLEGALLDLYAKCGDLGYAFKLFHSNPGRD 587

Query: 58  LVGITAMLGGFAMHGMGKE 2
           LV  TAM+GG+AMHGMG+E
Sbjct: 588 LVVFTAMVGGYAMHGMGEE 606



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
 Frame = -2

Query: 238 SILPVCGQLASVDLLRQCHGYIVRA--CFEDAYLKAALLDVYSKCGSLNSAYKLYQSTPQ 65
           SILP C QL ++   R+ H Y++R    ++D  +  AL+  Y+KC +L +AY  +   P 
Sbjct: 290 SILPACAQLQNLKAGREIHSYVLRHPYLYQDTSVGNALVSFYAKCNNLVAAYHTFLMIPS 349

Query: 64  KDLVGITAMLGGFAMHG 14
           +DL+   +ML  FA+ G
Sbjct: 350 RDLISWNSMLDAFAIGG 366


>ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Glycine max]
          Length = 875

 Score =  111 bits (277), Expect = 7e-23
 Identities = 49/79 (62%), Positives = 65/79 (82%)
 Frame = -2

Query: 238 SILPVCGQLASVDLLRQCHGYIVRACFEDAYLKAALLDVYSKCGSLNSAYKLYQSTPQKD 59
           S+LPVC Q+ASV LL QC GYI+R+CF+D +L+AALLD Y+KCG +  AYK++Q + +KD
Sbjct: 597 SLLPVCTQMASVHLLSQCQGYIIRSCFKDLHLEAALLDAYAKCGIIGRAYKIFQLSAEKD 656

Query: 58  LVGITAMLGGFAMHGMGKE 2
           LV  TAM+GG+AMHGM +E
Sbjct: 657 LVMFTAMIGGYAMHGMSEE 675


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