BLASTX nr result

ID: Scutellaria23_contig00033484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033484
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278977.1| PREDICTED: lissencephaly-1 homolog [Vitis vi...   151   6e-35
emb|CAN70337.1| hypothetical protein VITISV_011436 [Vitis vinifera]   151   6e-35
ref|XP_002516538.1| F-box and wd40 domain protein, putative [Ric...   146   2e-33
ref|XP_003527835.1| PREDICTED: lissencephaly-1 homolog [Glycine ...   145   4e-33
ref|XP_002281362.2| PREDICTED: uncharacterized WD repeat-contain...   142   2e-32

>ref|XP_002278977.1| PREDICTED: lissencephaly-1 homolog [Vitis vinifera]
          Length = 448

 Score =  151 bits (381), Expect = 6e-35
 Identities = 76/125 (60%), Positives = 96/125 (76%), Gaps = 8/125 (6%)
 Frame = -3

Query: 404 FSVLCLVTIEDLILSGSEDATIRIWKREE-NSFHSCLAVIDGHHRPVKCLAAAIETNEFV 228
           F+VLCL TI +LILSGSEDATIR+W+REE + FHSCLAV+DGHH PV+CLAA++E    +
Sbjct: 327 FAVLCLATIRELILSGSEDATIRVWRREEGHCFHSCLAVMDGHHGPVRCLAASLE----I 382

Query: 227 KALLVYSASLDQTLKVWRVKIYPTEKVSL-------DKTDDDSNCKMSPVLSPAWVEKKI 69
           + LLVYSASLD+T KVWRVK+   EK ++       D+  +   CKMSPVLSP+WVEKKI
Sbjct: 383 EGLLVYSASLDRTFKVWRVKLLTPEKAAMEELVVTNDQQTEIEECKMSPVLSPSWVEKKI 442

Query: 68  QGSDY 54
           Q + +
Sbjct: 443 QANHF 447


>emb|CAN70337.1| hypothetical protein VITISV_011436 [Vitis vinifera]
          Length = 448

 Score =  151 bits (381), Expect = 6e-35
 Identities = 76/125 (60%), Positives = 96/125 (76%), Gaps = 8/125 (6%)
 Frame = -3

Query: 404 FSVLCLVTIEDLILSGSEDATIRIWKREE-NSFHSCLAVIDGHHRPVKCLAAAIETNEFV 228
           F+VLCL TI +LILSGSEDATIR+W+REE + FHSCLAV+DGHH PV+CLAA++E    +
Sbjct: 327 FAVLCLATIRELILSGSEDATIRVWRREEGHCFHSCLAVMDGHHGPVRCLAASLE----I 382

Query: 227 KALLVYSASLDQTLKVWRVKIYPTEKVSL-------DKTDDDSNCKMSPVLSPAWVEKKI 69
           + LLVYSASLD+T KVWRVK+   EK ++       D+  +   CKMSPVLSP+WVEKKI
Sbjct: 383 EGLLVYSASLDRTFKVWRVKLLTPEKAAMEELVVTNDQQTEIEECKMSPVLSPSWVEKKI 442

Query: 68  QGSDY 54
           Q + +
Sbjct: 443 QANHF 447


>ref|XP_002516538.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223544358|gb|EEF45879.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 263

 Score =  146 bits (369), Expect = 2e-33
 Identities = 72/124 (58%), Positives = 89/124 (71%), Gaps = 7/124 (5%)
 Frame = -3

Query: 404 FSVLCLVTIEDLILSGSEDATIRIWKREENS-FHSCLAVIDGHHRPVKCLAAAIETNEFV 228
           F+VLCLV IE LI SGSED TIR+W+REE S FH CLAV+D H  PV+CLAA +E  + +
Sbjct: 139 FAVLCLVAIEKLIFSGSEDTTIRVWRREEGSYFHECLAVLDAHRGPVRCLAACLEMEKVM 198

Query: 227 KALLVYSASLDQTLKVWRVKIYPTEKVSLDKTDDD------SNCKMSPVLSPAWVEKKIQ 66
              LVYSASLD T KVWR+K+ P EKV LD TD        +  +MSPVLSP+WVE+K++
Sbjct: 199 MGFLVYSASLDHTFKVWRIKVLPEEKVCLDYTDQSDPKIKATEYEMSPVLSPSWVERKLR 258

Query: 65  GSDY 54
            S +
Sbjct: 259 ASPF 262


>ref|XP_003527835.1| PREDICTED: lissencephaly-1 homolog [Glycine max]
          Length = 457

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/127 (54%), Positives = 89/127 (70%), Gaps = 12/127 (9%)
 Frame = -3

Query: 404 FSVLCLVTIEDLILSGSEDATIRIWKREENS-FHSCLAVIDGHHRPVKCLAAAIETNEFV 228
           F+VLCL T+ +++ SGSED TIR+W+REE S +H CL V+DGH  PV+CLAA +E  + V
Sbjct: 328 FAVLCLATVGNMLFSGSEDTTIRVWRREEGSCYHECLTVLDGHRGPVRCLAACLEMEKVV 387

Query: 227 KALLVYSASLDQTLKVWRVKIYPTEKVSLDKTDDDSNCK-----------MSPVLSPAWV 81
              LVYSASLDQT KVWR+K+ P EK+ +D +     C+           MSPVLSP+WV
Sbjct: 388 MGFLVYSASLDQTFKVWRIKVLPDEKMCMDYSQYSDQCEAATRVKIRDYDMSPVLSPSWV 447

Query: 80  EKKIQGS 60
           EKK+QGS
Sbjct: 448 EKKLQGS 454


>ref|XP_002281362.2| PREDICTED: uncharacterized WD repeat-containing protein
           alr2800-like [Vitis vinifera]
          Length = 400

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/127 (55%), Positives = 92/127 (72%), Gaps = 10/127 (7%)
 Frame = -3

Query: 404 FSVLCLVTIEDLILSGSEDATIRIWKREENS-FHSCLAVIDGHHRPVKCLAAAIETNEFV 228
           F+VLCLV +E L+ SGSED TIR+W+REE S +H CLAV+DGH  PV+CLAA +E  + V
Sbjct: 273 FAVLCLVAVEKLVFSGSEDTTIRVWRREEGSCYHECLAVLDGHRGPVRCLAACLEMEKVV 332

Query: 227 KALLVYSASLDQTLKVWRVKIYPTE--KVSLDKTDDDSNCK-------MSPVLSPAWVEK 75
              LVYSASLDQT KVWR+++ P +  K+ LD+++   + K       MSPVLSP+WVEK
Sbjct: 333 MGFLVYSASLDQTFKVWRIRVLPDDQKKMCLDESNRSDSLKAKIMEYEMSPVLSPSWVEK 392

Query: 74  KIQGSDY 54
           K+Q S +
Sbjct: 393 KLQSSHF 399


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