BLASTX nr result

ID: Scutellaria23_contig00033457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033457
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    62   5e-08
ref|XP_002511070.1| pentatricopeptide repeat-containing protein,...    60   1e-07

>ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61800 [Vitis vinifera]
          Length = 576

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
 Frame = +2

Query: 47  SHLIAILKCSCKSAAQIHQVHAQSIARGL------SSLLLPHILHACTFSLSKPTGVSFT 208
           S  I +++  CKS  Q+HQVHA +I  GL      SSLLL +IL A T +L   T  S T
Sbjct: 16  SEAITVIR-QCKSLKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFT-ALLPTTNASPT 73

Query: 209 SGVA---YSSKIFDLILYPSAFDYNAVIRAHTLL 301
           +  A   Y+  +F+ I  PS F YN +IRAHTLL
Sbjct: 74  TPAALTGYALSVFNRIPNPSTFGYNTMIRAHTLL 107


>ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550185|gb|EEF51672.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 551

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
 Frame = +2

Query: 44  LSHLIAILKCSCKSAAQIHQVHAQSIARGLSSLLL---PHILHACTFSLSK-PTGVSFTS 211
           LSH I  L   CK+  Q++QVHAQ+  +GL SL     P IL    ++L+  PT  S  S
Sbjct: 26  LSHSIYTLIRQCKTINQLYQVHAQAFTKGLLSLTACSSPQILTKILYALTTIPTPKSSFS 85

Query: 212 GVAYSSKIFDLILYPSAFDYNAVIRAHTL 298
            + Y+   FD I  PS F YN +IR HTL
Sbjct: 86  LLHYAVSTFDNIQNPSTFCYNVIIRLHTL 114


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