BLASTX nr result

ID: Scutellaria23_contig00033424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033424
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   117   8e-25
ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putativ...   115   4e-24
ref|XP_002310257.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
gb|ABK92556.1| unknown [Populus trichocarpa]                          112   4e-23
ref|XP_003591129.1| DEAD-box ATP-dependent RNA helicase [Medicag...   112   4e-23

>ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Glycine
           max]
          Length = 601

 Score =  117 bits (294), Expect = 8e-25
 Identities = 63/77 (81%), Positives = 67/77 (87%)
 Frame = +3

Query: 114 PKPVVAGEEEHDDGEEQTFEELGLDARLIRALSKKSIEKPTPIQRVAIPLILEGKDVVAR 293
           PK  V  EEE +D   Q+FEELG+DARL+RAL KK IEKPTPIQRVAIPLILEGKDVVAR
Sbjct: 9   PKETVHKEEEEED---QSFEELGVDARLLRALIKKRIEKPTPIQRVAIPLILEGKDVVAR 65

Query: 294 AKTGSGKTLAYLLPLLQ 344
           AKTGSGKTLAYLLPLLQ
Sbjct: 66  AKTGSGKTLAYLLPLLQ 82


>ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223529859|gb|EEF31791.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 616

 Score =  115 bits (288), Expect = 4e-24
 Identities = 67/97 (69%), Positives = 76/97 (78%), Gaps = 4/97 (4%)
 Frame = +3

Query: 66  NVEEKKEHN--EAPVKAEPKPVVAGEEEHDDGEEQTFEELGLDARLIRALSKK--SIEKP 233
           N EEK   +  +  +K E + +   EEE ++ EE +FEELGLD RLIRAL+KK  SI KP
Sbjct: 3   NTEEKPHESTQDDEIKEELEEIKEEEEEEEE-EELSFEELGLDPRLIRALNKKEISIRKP 61

Query: 234 TPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQ 344
           TPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQ
Sbjct: 62  TPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQ 98


>ref|XP_002310257.1| predicted protein [Populus trichocarpa] gi|222853160|gb|EEE90707.1|
           predicted protein [Populus trichocarpa]
          Length = 597

 Score =  112 bits (279), Expect = 4e-23
 Identities = 65/99 (65%), Positives = 75/99 (75%), Gaps = 5/99 (5%)
 Frame = +3

Query: 63  DNVEEKKE---HNEAPVKAEPKPVVAGEEEHDDGEEQTFEELGLDARLIRALSKK--SIE 227
           D  +EKKE    ++  ++   +P V  EE   D E Q+FEELGLD RLIRAL+KK  SI 
Sbjct: 5   DKTKEKKEKESEHKQEIQLNEEPDVVEEE---DDEAQSFEELGLDPRLIRALNKKEISIA 61

Query: 228 KPTPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQ 344
           +PTPIQR AIPLIL+GKDVVARAKTGSGKTLAYLLPLLQ
Sbjct: 62  EPTPIQRAAIPLILQGKDVVARAKTGSGKTLAYLLPLLQ 100


>gb|ABK92556.1| unknown [Populus trichocarpa]
          Length = 619

 Score =  112 bits (279), Expect = 4e-23
 Identities = 65/99 (65%), Positives = 75/99 (75%), Gaps = 5/99 (5%)
 Frame = +3

Query: 63  DNVEEKKE---HNEAPVKAEPKPVVAGEEEHDDGEEQTFEELGLDARLIRALSKK--SIE 227
           D  +EKKE    ++  ++   +P V  EE   D E Q+FEELGLD RLIRAL+KK  SI 
Sbjct: 5   DKTKEKKEKESEHKQEIQLNEEPDVVEEE---DDEAQSFEELGLDPRLIRALNKKEISIA 61

Query: 228 KPTPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQ 344
           +PTPIQR AIPLIL+GKDVVARAKTGSGKTLAYLLPLLQ
Sbjct: 62  EPTPIQRAAIPLILQGKDVVARAKTGSGKTLAYLLPLLQ 100


>ref|XP_003591129.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355480177|gb|AES61380.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 604

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/68 (83%), Positives = 62/68 (91%)
 Frame = +3

Query: 141 EHDDGEEQTFEELGLDARLIRALSKKSIEKPTPIQRVAIPLILEGKDVVARAKTGSGKTL 320
           E +  E+++FEELGLDARL+RAL KK IEKPTPIQ VAIPLILEGKDVVARAKTGSGKTL
Sbjct: 18  EQEIDEDRSFEELGLDARLVRALLKKRIEKPTPIQHVAIPLILEGKDVVARAKTGSGKTL 77

Query: 321 AYLLPLLQ 344
           AYLLPLLQ
Sbjct: 78  AYLLPLLQ 85


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