BLASTX nr result

ID: Scutellaria23_contig00033348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033348
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79071.1| hypothetical protein VITISV_025552 [Vitis vinifera]    59   9e-19
gb|AAK50413.1|AC021891_14 Putative retroelement [Oryza sativa Ja...    64   2e-18
gb|ABB47538.2| retrotransposon protein, putative, Ty1-copia subc...    64   2e-18
emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]    59   2e-18
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]    59   3e-18

>emb|CAN79071.1| hypothetical protein VITISV_025552 [Vitis vinifera]
          Length = 243

 Score = 59.3 bits (142), Expect(2) = 9e-19
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = +2

Query: 146 AFFNGILQKLVLMAQPPGFVDPRFPEHVCKLNKVLYGFRQAPFAWFH 286
           AF  G L + V MA+PP FVD  +P ++CKL+K +YG +Q P AW+H
Sbjct: 106 AFLQGHLFEDVYMAEPPSFVDSNYPFYMCKLHKAIYGLKQTPHAWYH 152



 Score = 58.9 bits (141), Expect(2) = 9e-19
 Identities = 29/57 (50%), Positives = 38/57 (66%)
 Frame = +1

Query: 1   LVAQGFTQIPGIDFHHTFSPVIKASIVRVILAISV*RRWPLHQLDVKKCFLQWNLAE 171
           LV +GF Q P + +H TFS V+K +I  +IL+I+V   W LHQLDV   FLQ +L E
Sbjct: 58  LVVKGFNQQPRVXYHDTFSLVVKPTIAHLILSITVSCEWSLHQLDVNXAFLQGHLFE 114


>gb|AAK50413.1|AC021891_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1232

 Score = 63.5 bits (153), Expect(2) = 2e-18
 Identities = 27/50 (54%), Positives = 35/50 (70%)
 Frame = +2

Query: 140  KNAFFNGILQKLVLMAQPPGFVDPRFPEHVCKLNKVLYGFRQAPFAWFHR 289
            K+AF NG + + V + QPPGF +  FP HV KL+K LYG +QAP AW+ R
Sbjct: 948  KSAFLNGFIHEEVYVKQPPGFENSDFPNHVFKLSKALYGLKQAPMAWYDR 997



 Score = 53.5 bits (127), Expect(2) = 2e-18
 Identities = 24/51 (47%), Positives = 36/51 (70%)
 Frame = +1

Query: 1    LVAQGFTQIPGIDFHHTFSPVIKASIVRVILAISV*RRWPLHQLDVKKCFL 153
            LVAQGFTQ+ G+ F  TF+PV +   +R++LA +  + + L+Q+DVK  FL
Sbjct: 902  LVAQGFTQVEGLYFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFL 952


>gb|ABB47538.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1222

 Score = 63.5 bits (153), Expect(2) = 2e-18
 Identities = 27/50 (54%), Positives = 35/50 (70%)
 Frame = +2

Query: 140  KNAFFNGILQKLVLMAQPPGFVDPRFPEHVCKLNKVLYGFRQAPFAWFHR 289
            K+AF NG + + V + QPPGF +  FP HV KL+K LYG +QAP AW+ R
Sbjct: 912  KSAFLNGFIHEEVYVKQPPGFENSDFPNHVFKLSKALYGLKQAPMAWYDR 961



 Score = 53.5 bits (127), Expect(2) = 2e-18
 Identities = 24/51 (47%), Positives = 36/51 (70%)
 Frame = +1

Query: 1    LVAQGFTQIPGIDFHHTFSPVIKASIVRVILAISV*RRWPLHQLDVKKCFL 153
            LVAQGFTQ+ G+ F  TF+PV +   +R++LA +  + + L+Q+DVK  FL
Sbjct: 866  LVAQGFTQVEGLYFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFL 916


>emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]
          Length = 973

 Score = 59.3 bits (142), Expect(2) = 2e-18
 Identities = 26/48 (54%), Positives = 32/48 (66%)
 Frame = +2

Query: 140 KNAFFNGILQKLVLMAQPPGFVDPRFPEHVCKLNKVLYGFRQAPFAWF 283
           KNAF +G L + + M QP GF     PE+VCKL K LYG +QAP AW+
Sbjct: 585 KNAFLHGELDREIYMNQPXGFXSQGHPEYVCKLRKALYGLKQAPRAWY 632



 Score = 57.8 bits (138), Expect(2) = 2e-18
 Identities = 28/55 (50%), Positives = 38/55 (69%)
 Frame = +1

Query: 1   LVAQGFTQIPGIDFHHTFSPVIKASIVRVILAISV*RRWPLHQLDVKKCFLQWNL 165
           LVA+GF+Q  G+D+  TFSPV K + VRV+LA++  + W L Q+DVK  FL   L
Sbjct: 539 LVARGFSQQYGLDYDETFSPVAKLTTVRVLLALAANKDWDLWQMDVKNAFLHGEL 593


>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score = 58.5 bits (140), Expect(2) = 3e-18
 Identities = 26/48 (54%), Positives = 32/48 (66%)
 Frame = +2

Query: 140  KNAFFNGILQKLVLMAQPPGFVDPRFPEHVCKLNKVLYGFRQAPFAWF 283
            KNAF +G L + + M QP GF     PE+VCKL K LYG +QAP AW+
Sbjct: 895  KNAFLHGELDREIYMNQPMGFQSQGHPEYVCKLRKALYGLKQAPRAWY 942



 Score = 57.8 bits (138), Expect(2) = 3e-18
 Identities = 28/55 (50%), Positives = 38/55 (69%)
 Frame = +1

Query: 1    LVAQGFTQIPGIDFHHTFSPVIKASIVRVILAISV*RRWPLHQLDVKKCFLQWNL 165
            LVA+GF+Q  G+D+  TFSPV K + VRV+LA++  + W L Q+DVK  FL   L
Sbjct: 849  LVARGFSQQYGLDYDETFSPVXKLTTVRVLLALAANKDWDLWQMDVKNAFLHGEL 903


Top