BLASTX nr result

ID: Scutellaria23_contig00033331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033331
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278113.1| PREDICTED: structural maintenance of chromos...   212   4e-53
ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6...   208   8e-52
ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural m...   206   3e-51
ref|XP_004146918.1| PREDICTED: structural maintenance of chromos...   206   3e-51
ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabi...   205   7e-51

>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Vitis vinifera]
          Length = 1057

 Score =  212 bits (540), Expect = 4e-53
 Identities = 103/147 (70%), Positives = 127/147 (86%), Gaps = 1/147 (0%)
 Frame = +2

Query: 206 MADPRVFAETLRPN-RLQAGIISRIRLENFMCHSNLEIELGDWVNFITGQNGSGKSAILT 382
           M D  VF + L  + R  AGII +IRLENFMCHS+L+IELG+W+NF+TGQNGSGKSAILT
Sbjct: 1   MGDSTVFTQPLSASHRSSAGIILKIRLENFMCHSSLQIELGEWLNFVTGQNGSGKSAILT 60

Query: 383 ALCVAFGSRARGTQRANTIKDFIKTGCSHAVVQVEIKNQGEDAFKQELYGDIIILDRRIS 562
           ALCVAFGSRA+ TQRA T+K+FIKTGCS+AV+QVEIKN+GEDAFK E+YGD+II++RRIS
Sbjct: 61  ALCVAFGSRAKETQRATTLKEFIKTGCSYAVIQVEIKNEGEDAFKPEIYGDVIIVERRIS 120

Query: 563 ESTSSITLKNSQGKRIGTKREDLREIV 643
            STSS  LK+ QGKR+ +++EDL E+V
Sbjct: 121 VSTSSTVLKDHQGKRVASRKEDLHELV 147


>ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6, putative [Ricinus
           communis] gi|223550086|gb|EEF51573.1| structural
           maintenance of chromosomes 6 smc6, putative [Ricinus
           communis]
          Length = 1058

 Score =  208 bits (529), Expect = 8e-52
 Identities = 100/148 (67%), Positives = 129/148 (87%), Gaps = 2/148 (1%)
 Frame = +2

Query: 206 MADPRVFAETLRPNRLQ--AGIISRIRLENFMCHSNLEIELGDWVNFITGQNGSGKSAIL 379
           M D  VF+E   P R +  AG ++RIRLENFMCHSNL+IEL  WVNFITGQNGSGKSAIL
Sbjct: 1   MGDSTVFSEC-NPTRSRSGAGTVTRIRLENFMCHSNLQIELCPWVNFITGQNGSGKSAIL 59

Query: 380 TALCVAFGSRARGTQRANTIKDFIKTGCSHAVVQVEIKNQGEDAFKQELYGDIIILDRRI 559
           TALC+AFGSRA+GTQRA+T+KDFIKTGCS+AVV+VE+KN+G++AFK E+YGD II++RRI
Sbjct: 60  TALCIAFGSRAKGTQRASTLKDFIKTGCSYAVVEVEVKNEGDEAFKPEIYGDAIIIERRI 119

Query: 560 SESTSSITLKNSQGKRIGTKREDLREIV 643
           ++STSS  LK+ QGK++ +++E+LRE++
Sbjct: 120 NQSTSSTVLKDFQGKKVASRKEELRELI 147


>ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of
           chromosomes protein 6-like, partial [Cucumis sativus]
          Length = 969

 Score =  206 bits (524), Expect = 3e-51
 Identities = 99/146 (67%), Positives = 122/146 (83%)
 Frame = +2

Query: 206 MADPRVFAETLRPNRLQAGIISRIRLENFMCHSNLEIELGDWVNFITGQNGSGKSAILTA 385
           MAD R       P+R  AGI+  IRLENFMCHSNL I+ G+W+NFITGQNGSGKSAILTA
Sbjct: 1   MADSRAL-----PHRSGAGIVKSIRLENFMCHSNLYIQFGEWLNFITGQNGSGKSAILTA 55

Query: 386 LCVAFGSRARGTQRANTIKDFIKTGCSHAVVQVEIKNQGEDAFKQELYGDIIILDRRISE 565
           LCVAFG RA+GTQRA T+KDFIKTGCSHAV+ V ++N GEDAFK  +YGD+II++RRISE
Sbjct: 56  LCVAFGCRAKGTQRAATLKDFIKTGCSHAVIHVVLQNNGEDAFKHGIYGDVIIIERRISE 115

Query: 566 STSSITLKNSQGKRIGTKREDLREIV 643
           STS+I LK+ QGK++ ++R++LRE+V
Sbjct: 116 STSAIVLKDCQGKKVASRRDELRELV 141


>ref|XP_004146918.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Cucumis sativus]
          Length = 1052

 Score =  206 bits (524), Expect = 3e-51
 Identities = 99/146 (67%), Positives = 122/146 (83%)
 Frame = +2

Query: 206 MADPRVFAETLRPNRLQAGIISRIRLENFMCHSNLEIELGDWVNFITGQNGSGKSAILTA 385
           MAD R       P+R  AGI+  IRLENFMCHSNL I+ G+W+NFITGQNGSGKSAILTA
Sbjct: 1   MADSRAL-----PHRSGAGIVKSIRLENFMCHSNLYIQFGEWLNFITGQNGSGKSAILTA 55

Query: 386 LCVAFGSRARGTQRANTIKDFIKTGCSHAVVQVEIKNQGEDAFKQELYGDIIILDRRISE 565
           LCVAFG RA+GTQRA T+KDFIKTGCSHAV+ V ++N GEDAFK  +YGD+II++RRISE
Sbjct: 56  LCVAFGCRAKGTQRAATLKDFIKTGCSHAVIHVVLQNNGEDAFKHGIYGDVIIIERRISE 115

Query: 566 STSSITLKNSQGKRIGTKREDLREIV 643
           STS+I LK+ QGK++ ++R++LRE+V
Sbjct: 116 STSAIVLKDCQGKKVASRRDELRELV 141


>ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabidopsis thaliana]
           gi|9759587|dbj|BAB11444.1| SMC-like protein [Arabidopsis
           thaliana] gi|332003807|gb|AED91190.1| structural
           maintenance of chromosomes 6A [Arabidopsis thaliana]
          Length = 1058

 Score =  205 bits (521), Expect = 7e-51
 Identities = 98/129 (75%), Positives = 116/129 (89%)
 Frame = +2

Query: 257 AGIISRIRLENFMCHSNLEIELGDWVNFITGQNGSGKSAILTALCVAFGSRARGTQRANT 436
           +G I RIRLENFMCHSNLEIE GDWVNFITGQNGSGKSAILTALCVAFG RARGTQRA T
Sbjct: 20  SGKILRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAAT 79

Query: 437 IKDFIKTGCSHAVVQVEIKNQGEDAFKQELYGDIIILDRRISESTSSITLKNSQGKRIGT 616
           +KDFIKTGCS+A+V VE+KNQGEDAFK E+YGD +I++RRIS+STS   LK+ QG++I +
Sbjct: 80  LKDFIKTGCSYALVYVELKNQGEDAFKPEIYGDTLIIERRISDSTSLTVLKDHQGRKISS 139

Query: 617 KREDLREIV 643
           ++E+LRE+V
Sbjct: 140 RKEELRELV 148


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