BLASTX nr result

ID: Scutellaria23_contig00033279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033279
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327681.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23
ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23
ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containi...   112   4e-23

>ref|XP_002327681.1| predicted protein [Populus trichocarpa] gi|222836766|gb|EEE75159.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/82 (65%), Positives = 67/82 (81%)
 Frame = -3

Query: 248 VFKDMNEKNVYSYSSMIIGFAMHGRANSAIELFEEMVKMDVRPNSVTFMGVLTACSHGGL 69
           VF+ M E+NVYSYSSMI+GFAMHGR + A++LF+EMVK +++PN VTF+GVLTACSH G+
Sbjct: 338 VFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGM 397

Query: 68  VEQGHRFFETMEPSYGITPCVD 3
           VEQG + FE ME  YGI P  D
Sbjct: 398 VEQGWQIFELMEKCYGIKPSAD 419


>ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/82 (62%), Positives = 66/82 (80%)
 Frame = -3

Query: 248 VFKDMNEKNVYSYSSMIIGFAMHGRANSAIELFEEMVKMDVRPNSVTFMGVLTACSHGGL 69
           VF+ M E+NVYSYSSMI+GFAMHG A +A+ELF+EM+K +++PN VTF+GVLTACSH G+
Sbjct: 331 VFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGM 390

Query: 68  VEQGHRFFETMEPSYGITPCVD 3
           VEQG + F  ME  +G+ P  D
Sbjct: 391 VEQGQQLFAMMEECHGVAPSED 412


>ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  112 bits (281), Expect = 2e-23
 Identities = 49/82 (59%), Positives = 67/82 (81%)
 Frame = -3

Query: 248 VFKDMNEKNVYSYSSMIIGFAMHGRANSAIELFEEMVKMDVRPNSVTFMGVLTACSHGGL 69
           VF+ M E+NV+SYSSMI+G+AMHGRA+SA++LF +M+K ++RPN VTF+G+L+ACSH GL
Sbjct: 334 VFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGL 393

Query: 68  VEQGHRFFETMEPSYGITPCVD 3
           VEQG + F  ME  +G+ P  D
Sbjct: 394 VEQGRQLFAKMEKFFGVAPSPD 415


>ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  112 bits (281), Expect = 2e-23
 Identities = 49/82 (59%), Positives = 67/82 (81%)
 Frame = -3

Query: 248 VFKDMNEKNVYSYSSMIIGFAMHGRANSAIELFEEMVKMDVRPNSVTFMGVLTACSHGGL 69
           VF+ M E+NV+SYSSMI+G+AMHGRA+SA++LF +M+K ++RPN VTF+G+L+ACSH GL
Sbjct: 334 VFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGL 393

Query: 68  VEQGHRFFETMEPSYGITPCVD 3
           VEQG + F  ME  +G+ P  D
Sbjct: 394 VEQGRQLFAKMEKFFGVAPSPD 415


>ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Glycine max]
          Length = 617

 Score =  112 bits (279), Expect = 4e-23
 Identities = 50/82 (60%), Positives = 66/82 (80%)
 Frame = -3

Query: 248 VFKDMNEKNVYSYSSMIIGFAMHGRANSAIELFEEMVKMDVRPNSVTFMGVLTACSHGGL 69
           VFK M E+NV+SYSSMI+GFA+HGRA +AI+LF +M++  V+PN VTF+GVLTACSH GL
Sbjct: 301 VFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGL 360

Query: 68  VEQGHRFFETMEPSYGITPCVD 3
           V+QG + F +ME  YG+ P  +
Sbjct: 361 VDQGQQLFASMEKCYGVAPTAE 382


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