BLASTX nr result

ID: Scutellaria23_contig00033180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033180
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882733.1| pentatricopeptide repeat-containing protein ...   118   4e-25
ref|NP_187753.1| pentatricopeptide repeat-containing protein [Ar...   117   7e-25
ref|XP_002309422.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat...   110   9e-23
emb|CBI30310.3| unnamed protein product [Vitis vinifera]              110   9e-23

>ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328573|gb|EFH58992.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 620

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/97 (59%), Positives = 73/97 (75%)
 Frame = -2

Query: 298 NAFTFPFILKSSAALSLHVHGAQLHCHVIKSGCQLEPFVQTALISMYCRFCLLGDAYKVF 119
           +AF+FPFILKS A+LSL V G QLHCHVI+ GC+ EPFV TALISMYC+  L+ DA KVF
Sbjct: 49  DAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVF 108

Query: 118 DEIPDLNKVTVCYNALISGLVQKSQHSNGLFLLREMR 8
           +E P  +++ VCYNALISG    S+ S+  F+ R M+
Sbjct: 109 EENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMK 145


>ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g11460 gi|12322902|gb|AAG51440.1|AC008153_13
           hypothetical protein; 50785-52656 [Arabidopsis thaliana]
           gi|332641528|gb|AEE75049.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/97 (57%), Positives = 73/97 (75%)
 Frame = -2

Query: 298 NAFTFPFILKSSAALSLHVHGAQLHCHVIKSGCQLEPFVQTALISMYCRFCLLGDAYKVF 119
           +AF+FPFILKS A+LSL V G QLHCHV K GC+ EPFV TALISMYC+  L+ DA KVF
Sbjct: 52  DAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVF 111

Query: 118 DEIPDLNKVTVCYNALISGLVQKSQHSNGLFLLREMR 8
           +E P  ++++VCYNALISG    S+ ++  ++ R M+
Sbjct: 112 EENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMK 148


>ref|XP_002309422.1| predicted protein [Populus trichocarpa] gi|222855398|gb|EEE92945.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/97 (58%), Positives = 71/97 (73%)
 Frame = -2

Query: 298 NAFTFPFILKSSAALSLHVHGAQLHCHVIKSGCQLEPFVQTALISMYCRFCLLGDAYKVF 119
           NAFTFPF +KS AALSL + G QLHCHV K+GC LEPFVQT+LISMY +  L+ +A K+F
Sbjct: 9   NAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLF 68

Query: 118 DEIPDLNKVTVCYNALISGLVQKSQHSNGLFLLREMR 8
           DE P   K+TVCYN+L+SG    S+  + + L  EMR
Sbjct: 69  DENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMR 105


>ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/97 (56%), Positives = 69/97 (71%)
 Frame = -2

Query: 298 NAFTFPFILKSSAALSLHVHGAQLHCHVIKSGCQLEPFVQTALISMYCRFCLLGDAYKVF 119
           NAFTFPF  KS A+LSL + G+QLH HVIK+GC+ EPFVQT+LISMYC+   +  A KVF
Sbjct: 55  NAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVF 114

Query: 118 DEIPDLNKVTVCYNALISGLVQKSQHSNGLFLLREMR 8
           DE      + VCYNALI+G    S+ S+ + L R+MR
Sbjct: 115 DENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMR 151


>emb|CBI30310.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/97 (56%), Positives = 69/97 (71%)
 Frame = -2

Query: 298 NAFTFPFILKSSAALSLHVHGAQLHCHVIKSGCQLEPFVQTALISMYCRFCLLGDAYKVF 119
           NAFTFPF  KS A+LSL + G+QLH HVIK+GC+ EPFVQT+LISMYC+   +  A KVF
Sbjct: 55  NAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVF 114

Query: 118 DEIPDLNKVTVCYNALISGLVQKSQHSNGLFLLREMR 8
           DE      + VCYNALI+G    S+ S+ + L R+MR
Sbjct: 115 DENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMR 151


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