BLASTX nr result

ID: Scutellaria23_contig00033161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033161
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534218.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    68   9e-10
ref|XP_003620577.1| RING finger family protein [Medicago truncat...    64   1e-08
ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    64   1e-08
ref|XP_002325015.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
gb|ACU21036.1| unknown [Glycine max]                                   63   2e-08

>ref|XP_003534218.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
          Length = 419

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/47 (70%), Positives = 39/47 (82%), Gaps = 2/47 (4%)
 Frame = -1

Query: 142 PNSPDSVSNFQPSLAVVIGMLAIMFSLTFLLLLYAKFCH--HAAASS 8
           P+S D+VSNFQPSLAVVIG+L +MF LTF LL+YAKFCH  H  AS+
Sbjct: 28  PSSGDAVSNFQPSLAVVIGILGVMFLLTFFLLMYAKFCHRRHGGASA 74


>ref|XP_003620577.1| RING finger family protein [Medicago truncatula]
           gi|355495592|gb|AES76795.1| RING finger family protein
           [Medicago truncatula]
          Length = 362

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/53 (56%), Positives = 41/53 (77%)
 Frame = -1

Query: 184 YVRSQNPMENAEIIPNSPDSVSNFQPSLAVVIGMLAIMFSLTFLLLLYAKFCH 26
           ++R+Q+P +      NS D+VSNFQPSL VVI +L +MFSLTF+LL++AK CH
Sbjct: 18  HIRAQSPTQTT----NSQDAVSNFQPSLVVVIAILGLMFSLTFILLIFAKVCH 66


>ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
          Length = 426

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/48 (64%), Positives = 37/48 (77%)
 Frame = -1

Query: 154 AEIIPNSPDSVSNFQPSLAVVIGMLAIMFSLTFLLLLYAKFCHHAAAS 11
           A+    S D+VSNFQPSLAVVIG+L +MF LTF LL+YAKFC   A+S
Sbjct: 21  AQTAAPSGDAVSNFQPSLAVVIGILGVMFLLTFFLLMYAKFCQRCASS 68


>ref|XP_002325015.1| predicted protein [Populus trichocarpa] gi|222866449|gb|EEF03580.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/54 (59%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
 Frame = -1

Query: 160 ENAEIIPNSP--DSVSNFQPSLAVVIGMLAIMFSLTFLLLLYAKFCHHAAASSG 5
           +N  I  N P  D+VSNF+PSLAVVIG+L ++FSLTF+LL+YAKFCH      G
Sbjct: 21  QNTFIQGNEPSQDAVSNFRPSLAVVIGILFLIFSLTFILLIYAKFCHRGGLVHG 74


>gb|ACU21036.1| unknown [Glycine max]
          Length = 419

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/47 (68%), Positives = 38/47 (80%), Gaps = 2/47 (4%)
 Frame = -1

Query: 142 PNSPDSVSNFQPSLAVVIGMLAIMFSLTFLLLLYAKFCH--HAAASS 8
           P+S D+VSNFQPSLAVVIG+L +MF LTF LL+YAKF H  H  AS+
Sbjct: 28  PSSGDAVSNFQPSLAVVIGILGVMFLLTFFLLMYAKFGHRRHGGASA 74


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