BLASTX nr result

ID: Scutellaria23_contig00033120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033120
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    66   3e-09
ref|XP_004134365.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    59   5e-07
emb|CAN80225.1| hypothetical protein VITISV_006437 [Vitis vinifera]    55   6e-06

>ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Vitis vinifera]
          Length = 342

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 9/87 (10%)
 Frame = -3

Query: 322 AAEGPEGARRSYSLGSFEYIVDDCAYEVSAECTNHRRGFSDLNSSNKD-------SSVGI 164
           A+E  E ARRSYS+GSF+YIVD  + EV+   T HRRG S+ +++ KD       S+   
Sbjct: 202 ASESGE-ARRSYSVGSFDYIVDHES-EVTVAST-HRRGGSESSAAEKDKDDAGAQSNQLA 258

Query: 163 PEPE--ASAAEVSGGRNWLKEYVDRLA 89
           PEP   ++AAEV+ GR+WLK+YVDRL+
Sbjct: 259 PEPPGPSTAAEVASGRSWLKDYVDRLS 285


>ref|XP_004134365.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Cucumis sativus]
           gi|449487638|ref|XP_004157726.1| PREDICTED: E3
           ubiquitin-protein ligase ATL4-like [Cucumis sativus]
          Length = 339

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
 Frame = -3

Query: 319 AEGPEGARRSYSLGSFEYIVDDCAYEVSAECTN-HRRGFSDLNSSNKDSSVGIPEPEASA 143
           ++  EG RRSYS+GSFEY V++   +     TN HRR  SD        S  +    + A
Sbjct: 214 SDSAEG-RRSYSIGSFEYFVEE---DSEVNFTNAHRRSVSDKEDIEAPISA-VSTERSLA 268

Query: 142 AEVSGGRNWLKEYVDRLA 89
           AEV  GRNWLK+YVDRL+
Sbjct: 269 AEVGSGRNWLKDYVDRLS 286


>emb|CAN80225.1| hypothetical protein VITISV_006437 [Vitis vinifera]
          Length = 319

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 9/87 (10%)
 Frame = -3

Query: 322 AAEGPEGARRSYSLGSFEYIVDDCAYEVSAECTNHRRGFSDLNSSNKD-------SSVGI 164
           A+E  E AR+S S+GS EYIVD  + EV+   T HRRG S+  ++ KD       S+   
Sbjct: 192 ASESGE-ARQSSSVGSSEYIVDHES-EVTVAST-HRRGGSESRAAEKDKDDAGAQSNQLA 248

Query: 163 PEPE--ASAAEVSGGRNWLKEYVDRLA 89
           P+P   ++AAEV+ GR+W K+Y+DRL+
Sbjct: 249 PDPPGPSTAAEVASGRSWSKDYIDRLS 275


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