BLASTX nr result

ID: Scutellaria23_contig00033113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033113
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22115.3| unnamed protein product [Vitis vinifera]              206   1e-51
ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containi...   206   1e-51
ref|NP_178067.1| pentatricopeptide repeat-containing protein [Ar...   205   3e-51
ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|2...   204   6e-51
ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata] g...   204   8e-51

>emb|CBI22115.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  206 bits (525), Expect = 1e-51
 Identities = 102/116 (87%), Positives = 106/116 (91%)
 Frame = +3

Query: 3   RYFXXXXXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIA 182
           RYF          MGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAAL+A
Sbjct: 583 RYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALVA 642

Query: 183 VVHTLHRFRKRMLYYGVVPRRIKLVTGPTLRIVIAQMLNSMESPFEVSKVVLRAPG 350
           VVHTLHRFRKRMLYYGVVPRRIKLVTGPTL+IV+AQMLNS+ESPFEVSKVVLRAPG
Sbjct: 643 VVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVVAQMLNSVESPFEVSKVVLRAPG 698


>ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
            mitochondrial-like [Vitis vinifera]
          Length = 844

 Score =  206 bits (525), Expect = 1e-51
 Identities = 102/116 (87%), Positives = 106/116 (91%)
 Frame = +3

Query: 3    RYFXXXXXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIA 182
            RYF          MGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAAL+A
Sbjct: 670  RYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALVA 729

Query: 183  VVHTLHRFRKRMLYYGVVPRRIKLVTGPTLRIVIAQMLNSMESPFEVSKVVLRAPG 350
            VVHTLHRFRKRMLYYGVVPRRIKLVTGPTL+IV+AQMLNS+ESPFEVSKVVLRAPG
Sbjct: 730  VVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVVAQMLNSVESPFEVSKVVLRAPG 785


>ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
            DEFECTIVE 2217; Flags: Precursor
            gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis
            thaliana] gi|332198129|gb|AEE36250.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 836

 Score =  205 bits (522), Expect = 3e-51
 Identities = 103/116 (88%), Positives = 106/116 (91%)
 Frame = +3

Query: 3    RYFXXXXXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIA 182
            RYF          MGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIA
Sbjct: 664  RYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIA 723

Query: 183  VVHTLHRFRKRMLYYGVVPRRIKLVTGPTLRIVIAQMLNSMESPFEVSKVVLRAPG 350
            VVHTLHRFRKRMLYYGVVPRRIKLVTGPTL+IVIAQML+S+ESPFEVSKVVLRAPG
Sbjct: 724  VVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSSVESPFEVSKVVLRAPG 779


>ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|222865192|gb|EEF02323.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score =  204 bits (519), Expect = 6e-51
 Identities = 100/116 (86%), Positives = 106/116 (91%)
 Frame = +3

Query: 3   RYFXXXXXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIA 182
           +YF          MGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAAL+A
Sbjct: 613 KYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALVA 672

Query: 183 VVHTLHRFRKRMLYYGVVPRRIKLVTGPTLRIVIAQMLNSMESPFEVSKVVLRAPG 350
           VVHTLHRFRKRMLYYGV+PRRIKLVTGPTLRIV+AQML+S+ESPFEVSKVVLRAPG
Sbjct: 673 VVHTLHRFRKRMLYYGVIPRRIKLVTGPTLRIVVAQMLSSVESPFEVSKVVLRAPG 728


>ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
            gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 832

 Score =  204 bits (518), Expect = 8e-51
 Identities = 102/116 (87%), Positives = 106/116 (91%)
 Frame = +3

Query: 3    RYFXXXXXXXXXXMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIA 182
            RYF          MGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIA
Sbjct: 660  RYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIA 719

Query: 183  VVHTLHRFRKRMLYYGVVPRRIKLVTGPTLRIVIAQMLNSMESPFEVSKVVLRAPG 350
            VVHTLHRFRKRMLYYGVVPRRIKLVTGPTL+IVIAQ+L+S+ESPFEVSKVVLRAPG
Sbjct: 720  VVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQVLSSVESPFEVSKVVLRAPG 775


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