BLASTX nr result

ID: Scutellaria23_contig00033106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033106
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, p...   100   1e-19
ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni...    99   3e-19
ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
gb|ABK93461.1| unknown [Populus trichocarpa]                           98   8e-19
ref|XP_004171728.1| PREDICTED: tRNA-splicing endonuclease subuni...    95   7e-18

>ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus
           communis] gi|223534295|gb|EEF36007.1| tRNA-splicing
           endonuclease subunit Sen2-2, putative [Ricinus communis]
          Length = 237

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
 Frame = -3

Query: 291 VHSEYAVVALSD-DRNTNARLKVWTDFHCTLRLCGSVSKTLLLLHVSKNGKDTN-HSSLE 118
           VHSEYAV+ LS+ D N N RL+VW+DFHCTLRLCGSV+KTLL+L ++KN   T   S LE
Sbjct: 155 VHSEYAVLVLSEEDANANGRLRVWSDFHCTLRLCGSVAKTLLVLGINKNCHGTTLPSCLE 214

Query: 117 HYSVEERIVTRWNPELSRE 61
            YSVEER   RW+P+ SRE
Sbjct: 215 KYSVEERTFARWSPQQSRE 233


>ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis
           vinifera]
          Length = 242

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
 Frame = -3

Query: 291 VHSEYAVVALSDDR-NTNARLKVWTDFHCTLRLCGSVSKTLLLLHVSKNGKD-TNHSSLE 118
           VHSEYAV+ LS++  N N RL+VW+DF CT+RLCGSV+KTLL++H++KNG   T    L+
Sbjct: 155 VHSEYAVLVLSEENENANGRLRVWSDFDCTIRLCGSVAKTLLVIHINKNGHGATTPLCLK 214

Query: 117 HYSVEERIVTRWNPELSRENHTME 46
            YSVEER +TRW+ E  RE  T E
Sbjct: 215 KYSVEERTITRWSAEQCREVQTPE 238


>ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|222850135|gb|EEE87682.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
 Frame = -3

Query: 291 VHSEYAVVALSDDRNTNARLKVWTDFHCTLRLCGSVSKTLLLLHVSKNGKDT-NHSSLEH 115
           VHSEYAV+ LS+      RL+VW+DFHCT+RLCGSV+KTLL+L+V KNG    + S LE 
Sbjct: 155 VHSEYAVIVLSE--GDTGRLRVWSDFHCTIRLCGSVAKTLLILNVDKNGHGAISPSCLER 212

Query: 114 YSVEERIVTRWNPELSREN 58
           YSVEE  +TRW+PE SR++
Sbjct: 213 YSVEECTITRWSPEQSRDD 231


>gb|ABK93461.1| unknown [Populus trichocarpa]
          Length = 235

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
 Frame = -3

Query: 291 VHSEYAVVALSDDRNTNARLKVWTDFHCTLRLCGSVSKTLLLLHVSKNGKDT-NHSSLEH 115
           VHSEYAV+ LS+      RL+VW+DFHCT+RLCGSV+KTLL+L+V KNG    + S LE 
Sbjct: 155 VHSEYAVIVLSE--GDTGRLRVWSDFHCTIRLCGSVAKTLLILNVDKNGHGAISPSCLER 212

Query: 114 YSVEERIVTRWNPELSREN 58
           YSVEE  +TRW+PE SR++
Sbjct: 213 YSVEECTITRWSPEQSRDD 231


>ref|XP_004171728.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-2-like [Cucumis
           sativus]
          Length = 281

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/81 (59%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
 Frame = -3

Query: 291 VHSEYAVVALSD--DRNTNARLKVWTDFHCTLRLCGSVSKTLLLLHVSKNGKD-TNHSSL 121
           VHSE+AV+ L +  D N N RL+VW+DF CT+RLCGSV+KTLL+L V+ NG    + S L
Sbjct: 197 VHSEFAVLVLCEATDSNGNGRLRVWSDFLCTVRLCGSVAKTLLVLTVNDNGSGFVSPSCL 256

Query: 120 EHYSVEERIVTRWNPELSREN 58
           + YS+EER VTRW+PE  REN
Sbjct: 257 DSYSIEERTVTRWSPEQCREN 277


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