BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033097
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...   140   8e-32
ref|XP_003516687.1| PREDICTED: DNA-directed RNA polymerase D sub...   126   2e-27
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   124   1e-26
ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D sub...   122   3e-26
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   120   9e-26

>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score =  140 bits (354), Expect = 8e-32
 Identities = 64/89 (71%), Positives = 76/89 (85%)
 Frame = -1

Query: 269  DYSEAYGIDVAWQYFVNNLHCAISDTGKSILPEHLVVTANCLSLTGEFMPLNARGLALQR 90
            DY EA+GID AW  FVN+L+ AIS+TGK+ILPEHL+ TANCLS+TGEF+ LNA+GLA QR
Sbjct: 836  DYGEAFGIDTAWMCFVNSLNSAISETGKTILPEHLIATANCLSMTGEFVSLNAKGLAQQR 895

Query: 89   KETNVCSPFSQACFLNPSDCFVKAAKLGQ 3
            KE  + SPF QACF NPSDCF+KAAK+GQ
Sbjct: 896  KEATINSPFVQACFSNPSDCFIKAAKMGQ 924


>ref|XP_003516687.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Glycine max]
          Length = 1622

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/87 (66%), Positives = 68/87 (78%)
 Frame = -1

Query: 266  YSEAYGIDVAWQYFVNNLHCAISDTGKSILPEHLVVTANCLSLTGEFMPLNARGLALQRK 87
            +S AYGID  WQYF N+L CA SDTGKSILP+HL + AN LS +GEF+ LNA+G+ALQRK
Sbjct: 1164 FSSAYGIDAGWQYFFNSLACATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQRK 1223

Query: 86   ETNVCSPFSQACFLNPSDCFVKAAKLG 6
              +V SPF QACF NP  CF+KAAK G
Sbjct: 1224 HASVSSPFVQACFANPGSCFIKAAKSG 1250


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/88 (64%), Positives = 70/88 (79%)
 Frame = -1

Query: 269  DYSEAYGIDVAWQYFVNNLHCAISDTGKSILPEHLVVTANCLSLTGEFMPLNARGLALQR 90
            D + AYGIDVAW+YF+  LH A+S+TGK ILPEHLV+ A+ L+ TGEF+PL+A+GL LQR
Sbjct: 840  DLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTTTGEFVPLSAKGLTLQR 899

Query: 89   KETNVCSPFSQACFLNPSDCFVKAAKLG 6
            K   V SPF QACF NP D FV+AAK+G
Sbjct: 900  KAAGVVSPFMQACFTNPGDSFVRAAKMG 927


>ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Glycine max]
          Length = 1461

 Score =  122 bits (306), Expect = 3e-26
 Identities = 57/87 (65%), Positives = 67/87 (77%)
 Frame = -1

Query: 266  YSEAYGIDVAWQYFVNNLHCAISDTGKSILPEHLVVTANCLSLTGEFMPLNARGLALQRK 87
            +S AYGID  WQYF N+L  A SDTGKSILP+HL + AN LS +GEF+ LNA+G+ALQRK
Sbjct: 1171 FSSAYGIDAGWQYFFNSLASATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQRK 1230

Query: 86   ETNVCSPFSQACFLNPSDCFVKAAKLG 6
              +V SPF QACF NP  CF+KAAK G
Sbjct: 1231 HASVSSPFVQACFANPGSCFIKAAKSG 1257


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
            gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
            [Populus trichocarpa]
          Length = 1517

 Score =  120 bits (302), Expect = 9e-26
 Identities = 52/84 (61%), Positives = 68/84 (80%)
 Frame = -1

Query: 257  AYGIDVAWQYFVNNLHCAISDTGKSILPEHLVVTANCLSLTGEFMPLNARGLALQRKETN 78
            AYGID  W++F+NNL  A+SD GK++LPEHL++ ANCLS+TGEF+ LNA+GL  QR+  +
Sbjct: 1206 AYGIDAGWKFFLNNLQSAMSDVGKTVLPEHLLLVANCLSVTGEFVGLNAKGLKRQREHAS 1265

Query: 77   VCSPFSQACFLNPSDCFVKAAKLG 6
            V +PF QACF NP DCF++AAK G
Sbjct: 1266 VSTPFVQACFSNPGDCFIRAAKAG 1289