BLASTX nr result

ID: Scutellaria23_contig00033092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033092
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    95   5e-18
emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana] ...    92   3e-17
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...    92   4e-17
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]    90   2e-16
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]    90   2e-16

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/72 (62%), Positives = 55/72 (76%)
 Frame = +2

Query: 2   KSEAFQTFKDWLKQQETKTGRTLKFLRTDNGLEYLSFEFQEFCKEKGIMRHKTVAANPQQ 181
           KSEAFQ FK+W    E +TG+ +K LRTDNGLE+   EF +FCK++GI RH+TV   PQQ
Sbjct: 511 KSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQ 570

Query: 182 NGVAEWMNRTLL 217
           NGVAE MN+TLL
Sbjct: 571 NGVAERMNQTLL 582


>emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana]
           gi|7267743|emb|CAB78169.1| putative retrotransposon
           [Arabidopsis thaliana]
          Length = 1230

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/72 (58%), Positives = 53/72 (73%)
 Frame = +2

Query: 2   KSEAFQTFKDWLKQQETKTGRTLKFLRTDNGLEYLSFEFQEFCKEKGIMRHKTVAANPQQ 181
           K EAF TF +W    E +TGR +K LR DNGLE+ + +F +FCKEKGI+RH+T A  PQQ
Sbjct: 523 KDEAFGTFAEWSVMVENQTGRKIKILRIDNGLEFCNQQFNDFCKEKGIVRHQTCAYTPQQ 582

Query: 182 NGVAEWMNRTLL 217
           NGVAE MN T++
Sbjct: 583 NGVAERMNHTIM 594


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 41/72 (56%), Positives = 55/72 (76%)
 Frame = +2

Query: 2   KSEAFQTFKDWLKQQETKTGRTLKFLRTDNGLEYLSFEFQEFCKEKGIMRHKTVAANPQQ 181
           K EAF+ F +W K  E ++ R +K LRTDNGLEY +  F++FCKE+GI+RHKT A  PQQ
Sbjct: 515 KDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKTCAYTPQQ 574

Query: 182 NGVAEWMNRTLL 217
           NG+AE +NRT++
Sbjct: 575 NGIAERLNRTIM 586


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/72 (55%), Positives = 54/72 (75%)
 Frame = +2

Query: 2   KSEAFQTFKDWLKQQETKTGRTLKFLRTDNGLEYLSFEFQEFCKEKGIMRHKTVAANPQQ 181
           K E F  FK+W    E +TG+ +K LRTDNGLE+ + +F EFC+++GI+RH+TV   PQQ
Sbjct: 632 KDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQ 691

Query: 182 NGVAEWMNRTLL 217
           NGVAE MN+TL+
Sbjct: 692 NGVAERMNQTLV 703


>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/72 (55%), Positives = 54/72 (75%)
 Frame = +2

Query: 2   KSEAFQTFKDWLKQQETKTGRTLKFLRTDNGLEYLSFEFQEFCKEKGIMRHKTVAANPQQ 181
           K E F  FK+W    E +TG+ +K LRTDNGLE+ + +F EFC+++GI+RH+TV   PQQ
Sbjct: 487 KDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQ 546

Query: 182 NGVAEWMNRTLL 217
           NGVAE MN+TL+
Sbjct: 547 NGVAERMNQTLV 558


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