BLASTX nr result

ID: Scutellaria23_contig00033048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033048
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520874.1| pentatricopeptide repeat-containing protein,...    96   2e-18
ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containi...    92   3e-17
emb|CBI25349.3| unnamed protein product [Vitis vinifera]               92   3e-17
ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|NP_181604.1| pentatricopeptide repeat-containing protein [Ar...    89   4e-16

>ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540005|gb|EEF41583.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 833

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/96 (50%), Positives = 60/96 (62%)
 Frame = -3

Query: 302 DVVAWGSIMSGSCENRKFKEVLCLYIRMVYDGVRPDPSIIASAITACVGYGDEKLGGCFH 123
           DVVAWGS++SG C+NRK+KE L  +  M  D V+PD  I+AS I+AC G     LG   H
Sbjct: 407 DVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIH 466

Query: 122 GWAIKEGLDLDALTGCSLIEFYSKCGKPDMARKAFS 15
           G+ IK GL LD     SL++ YSK G P+ A   FS
Sbjct: 467 GFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFS 502


>ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/98 (43%), Positives = 64/98 (65%)
 Frame = -3

Query: 302 DVVAWGSIMSGSCENRKFKEVLCLYIRMVYDGVRPDPSIIASAITACVGYGDEKLGGCFH 123
           DVVAWGS+++G C+NR+FK+ L L+  M  +GV+ D  ++ S I+A +G  + +LG   H
Sbjct: 410 DVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIH 469

Query: 122 GWAIKEGLDLDALTGCSLIEFYSKCGKPDMARKAFSKV 9
           G+AIK GL+ D    CSL++ YSK G  + A   FS +
Sbjct: 470 GFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSM 507


>emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/98 (43%), Positives = 64/98 (65%)
 Frame = -3

Query: 302  DVVAWGSIMSGSCENRKFKEVLCLYIRMVYDGVRPDPSIIASAITACVGYGDEKLGGCFH 123
            DVVAWGS+++G C+NR+FK+ L L+  M  +GV+ D  ++ S I+A +G  + +LG   H
Sbjct: 815  DVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIH 874

Query: 122  GWAIKEGLDLDALTGCSLIEFYSKCGKPDMARKAFSKV 9
            G+AIK GL+ D    CSL++ YSK G  + A   FS +
Sbjct: 875  GFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSM 912


>ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|222857719|gb|EEE95266.1|
           predicted protein [Populus trichocarpa]
          Length = 848

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/96 (46%), Positives = 58/96 (60%)
 Frame = -3

Query: 302 DVVAWGSIMSGSCENRKFKEVLCLYIRMVYDGVRPDPSIIASAITACVGYGDEKLGGCFH 123
           DVVAWGS++SG C+NRK+ E L  Y  M   G +PD  I+AS ++AC G  +  LG   H
Sbjct: 422 DVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIH 481

Query: 122 GWAIKEGLDLDALTGCSLIEFYSKCGKPDMARKAFS 15
           G AIK GL+ D     SL++ YSK   P M+   FS
Sbjct: 482 GLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFS 517


>ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g40720 gi|330254774|gb|AEC09868.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
 Frame = -3

Query: 302 DVVAWGSIMSGSCENRKFKEVLCLYIRMVYD--GVRPDPSIIASAITACVGYGDEKLGGC 129
           D+VAWGS++SG C+N KFKE L ++  M  D   ++PD  I+ S   AC G    + G  
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ 497

Query: 128 FHGWAIKEGLDLDALTGCSLIEFYSKCGKPDMARKAFSKVS 6
            HG  IK GL L+   G SLI+ YSKCG P+MA K F+ +S
Sbjct: 498 VHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS 538


Top