BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033004
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF96894.1| retrotransposon protein, putative, Ty3-gypsy subc...    62   8e-17
gb|ABB47013.1| retrotransposon protein, putative, Ty3-gypsy subc...    59   2e-16
gb|ABA97615.1| retrotransposon protein, putative, unclassified [...    58   4e-16
gb|AAU44099.1| putative polyprotein [Oryza sativa Japonica Group]      56   2e-15
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]              58   2e-15

>gb|ABF96894.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 351

 Score = 61.6 bits (148), Expect(2) = 8e-17
 Identities = 24/59 (40%), Positives = 44/59 (74%)
 Frame = +2

Query: 23  VRLGSHLSEQVKGGIVAALQDNVDLFTWKPEDMKGINPEVAVYKLNIKPDVRPIKQKLN 199
           + LGS LSEQ   GI+A L+ N+D+F W P+D+ G++P++ +++L +KP+ +P  +K++
Sbjct: 150 ISLGSDLSEQEVEGILAVLKKNIDIFAWGPDDVGGVSPDLIMHRLAVKPEAKPKLRKMS 208



 Score = 50.1 bits (118), Expect(2) = 8e-17
 Identities = 22/36 (61%), Positives = 27/36 (75%)
 Frame = +1

Query: 259 GHIEEIQYP*WLANVVLVPKPGSKWRMCIDFRDLIK 366
           G I+EI +P WLAN VLV K  +KWR+C+DF DL K
Sbjct: 226 GVIQEIDHPDWLANPVLVRKSNAKWRICVDFTDLNK 261


>gb|ABB47013.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1475

 Score = 58.9 bits (141), Expect(2) = 2e-16
 Identities = 24/62 (38%), Positives = 40/62 (64%)
 Frame = +2

Query: 11  PGHSVRLGSHLSEQVKGGIVAALQDNVDLFTWKPEDMKGINPEVAVYKLNIKPDVRPIKQ 190
           P   + LG  + EQ   GI+A L+ N+D+F W P+++ G+  ++ ++ L +KPD +P KQ
Sbjct: 601 PAKLISLGDGMGEQEAEGILAVLKKNIDIFAWSPDEVGGVLTDLIMHHLAVKPDAKPRKQ 660

Query: 191 KL 196
           KL
Sbjct: 661 KL 662



 Score = 51.2 bits (121), Expect(2) = 2e-16
 Identities = 23/36 (63%), Positives = 26/36 (72%)
 Frame = +1

Query: 259 GHIEEIQYP*WLANVVLVPKPGSKWRMCIDFRDLIK 366
           G I+EI +P WLAN VLV K   KWRMC+DF DL K
Sbjct: 684 GVIQEIDHPEWLANPVLVRKSNDKWRMCVDFTDLNK 719


>gb|ABA97615.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 827

 Score = 58.2 bits (139), Expect(2) = 4e-16
 Identities = 24/62 (38%), Positives = 41/62 (66%)
 Frame = +2

Query: 11  PGHSVRLGSHLSEQVKGGIVAALQDNVDLFTWKPEDMKGINPEVAVYKLNIKPDVRPIKQ 190
           P   + LG  + EQ   GI+A L+ N+D+F W P+++  ++ ++ +++L IKPD +P KQ
Sbjct: 267 PAKLISLGDGMGEQEAEGILAVLKKNIDIFAWSPDEVGVVSTDLIMHQLAIKPDAKPRKQ 326

Query: 191 KL 196
           KL
Sbjct: 327 KL 328



 Score = 51.2 bits (121), Expect(2) = 4e-16
 Identities = 23/36 (63%), Positives = 26/36 (72%)
 Frame = +1

Query: 259 GHIEEIQYP*WLANVVLVPKPGSKWRMCIDFRDLIK 366
           G I+EI +P WLAN VLV K   KWRMC+DF DL K
Sbjct: 350 GVIQEIDHPEWLANPVLVRKSNGKWRMCVDFTDLNK 385


>gb|AAU44099.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1645

 Score = 55.8 bits (133), Expect(2) = 2e-15
 Identities = 22/58 (37%), Positives = 38/58 (65%)
 Frame = +2

Query: 23   VRLGSHLSEQVKGGIVAALQDNVDLFTWKPEDMKGINPEVAVYKLNIKPDVRPIKQKL 196
            V LG  + E+    I+  L+ N+D+F W P+++ G++ ++ +Y L +KPD +P KQKL
Sbjct: 831  VSLGGDMGEEEAKNILEVLEKNIDIFAWGPDEVGGVSADLIMYHLAVKPDAKPRKQKL 888



 Score = 51.2 bits (121), Expect(2) = 2e-15
 Identities = 23/36 (63%), Positives = 26/36 (72%)
 Frame = +1

Query: 259  GHIEEIQYP*WLANVVLVPKPGSKWRMCIDFRDLIK 366
            G I+EI +P WLAN VLV K   KWRMC+DF DL K
Sbjct: 910  GVIQEIDHPEWLANPVLVRKSNGKWRMCVDFTDLNK 945


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score = 57.8 bits (138), Expect(2) = 2e-15
 Identities = 25/66 (37%), Positives = 40/66 (60%)
 Frame = +2

Query: 11  PGHSVRLGSHLSEQVKGGIVAALQDNVDLFTWKPEDMKGINPEVAVYKLNIKPDVRPIKQ 190
           P   V +G+ +S  ++  ++A L+ N   F W  EDMKGI+P +  ++LN+ P  +P+KQ
Sbjct: 768 PTRCVGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNVDPTFKPVKQ 827

Query: 191 KLNILG 208
           K   LG
Sbjct: 828 KRRKLG 833



 Score = 48.9 bits (115), Expect(2) = 2e-15
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = +1

Query: 259 GHIEEIQYP*WLANVVLVPKPGSKWRMCIDFRDLIK 366
           G I E++YP WLAN V+V K   KWR+C+D+ DL K
Sbjct: 851 GQIIEVKYPEWLANPVVVKKKNGKWRVCVDYTDLNK 886