BLASTX nr result

ID: Scutellaria23_contig00032916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00032916
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34116.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_002514422.1| pentatricopeptide repeat-containing protein,...    67   2e-09
ref|XP_002525881.1| pentatricopeptide repeat-containing protein,...    64   2e-08
ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06

>emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/114 (38%), Positives = 64/114 (56%)
 Frame = +3

Query: 12  MVFSTIRFVSRNHLFKNLQFIRLHSVPSLAHFTPYFSDSGSEDPSSRKDISLANYSDSAD 191
           M  S+ R+VS      ++Q  R +SV  LAH +P      ++ P + +        DS  
Sbjct: 1   MWVSSTRWVSCRKFITHVQLTRFNSVWGLAHLSP-----AAQYPIAEEQAVYTYSKDSVG 55

Query: 192 DRISSPGLSSSGVVKILENMQMEPTSALSFFNQLKEKGFQHDVNCYLAMIKILC 353
           DR     L++S VV+I  N++ EP  A SFF QLKE GFQH+V+ Y A+I++LC
Sbjct: 56  DRFID--LNTSRVVEIFYNLKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLC 107


>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/114 (38%), Positives = 64/114 (56%)
 Frame = +3

Query: 12  MVFSTIRFVSRNHLFKNLQFIRLHSVPSLAHFTPYFSDSGSEDPSSRKDISLANYSDSAD 191
           M  S+ R+VS      ++Q  R +SV  LAH +P      ++ P + +        DS  
Sbjct: 1   MWVSSTRWVSCRKFITHVQLTRFNSVWGLAHLSP-----AAQYPIAEEQAVYTYSKDSVG 55

Query: 192 DRISSPGLSSSGVVKILENMQMEPTSALSFFNQLKEKGFQHDVNCYLAMIKILC 353
           DR     L++S VV+I  N++ EP  A SFF QLKE GFQH+V+ Y A+I++LC
Sbjct: 56  DRFID--LNTSRVVEIFYNLKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLC 107


>ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546418|gb|EEF47918.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 809

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/115 (33%), Positives = 63/115 (54%)
 Frame = +3

Query: 12  MVFSTIRFVSRNHLFKNLQFIRLHSVPSLAHFTPYFSDSGSEDPSSRKDISLANYSDSAD 191
           M  S+I+  S     K++ FIRL++V +LAHF           P   +     +Y +   
Sbjct: 1   MWVSSIKLFSCRKYIKHVNFIRLYTVSALAHFNY---------PIEEEQTINTHYQNPVT 51

Query: 192 DRISSPGLSSSGVVKILENMQMEPTSALSFFNQLKEKGFQHDVNCYLAMIKILCY 356
           + +    ++++ VV  L N++ EP+ A S+FNQLKE G+ HD   Y A+++ILC+
Sbjct: 52  NHLFE--INTAKVVITLNNLRNEPSLAFSYFNQLKESGYSHDPYTYAAIVRILCF 104


>ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534795|gb|EEF36485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 913

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = +3

Query: 213 LSSSGVVKILENMQMEPTSALSFFNQLKEKGFQHDVNCYLAMIKILCY 356
           L S  VV IL N++ +P SALSFFNQLK+ GF+HD++ Y A+I+ILCY
Sbjct: 64  LDSFKVVDILYNLKNQPISALSFFNQLKDSGFKHDISTYAAIIRILCY 111


>ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Cucumis sativus]
          Length = 795

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/44 (52%), Positives = 36/44 (81%)
 Frame = +3

Query: 222 SGVVKILENMQMEPTSALSFFNQLKEKGFQHDVNCYLAMIKILC 353
           S VV++LE+++ EP  A SFF +L+E+GFQH+++ Y A+I+ILC
Sbjct: 60  SKVVQVLESLRREPKIAFSFFCELEERGFQHNISTYAALIRILC 103


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