BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00032718
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum in...    72   6e-11
sp|Q68S16.1|RPOC2_PANGI RecName: Full=DNA-directed RNA polymeras...    71   1e-10
ref|YP_004935542.1| RNA polymerase beta'' subunit (chloroplast) ...    71   1e-10
ref|YP_086956.2| RNA polymerase beta'' subunit [Panax ginseng]         71   1e-10
ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) ...    69   4e-10

>ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum indicum]
            gi|378747302|gb|AEO92696.2| RNA polymerase beta'' subunit
            (chloroplast) [Sesamum indicum]
          Length = 1390

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = -2

Query: 274  EMRDILFHHRKFFDSFLSKNFHDRPEQSFIGLNDS 170
            E RDILFHHRK FDSFLSKNFHDRPEQSFIG NDS
Sbjct: 1356 ETRDILFHHRKLFDSFLSKNFHDRPEQSFIGFNDS 1390


>sp|Q68S16.1|RPOC2_PANGI RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta''; Short=RNA polymerase subunit beta''
            gi|51235303|gb|AAT98499.1| RNA polymerase beta II subunit
            [Panax ginseng]
          Length = 1387

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = -2

Query: 274  EMRDILFHHRKFFDSFLSKNFHDRPEQSFIGLNDS 170
            EMRDILFHHRKFFDS LSKNFHD PEQSFIG NDS
Sbjct: 1353 EMRDILFHHRKFFDSCLSKNFHDTPEQSFIGFNDS 1387


>ref|YP_004935542.1| RNA polymerase beta'' subunit (chloroplast) [Eleutherococcus
            senticosus] gi|347448196|gb|AEO92608.1| RNA polymerase
            beta'' subunit (chloroplast) [Eleutherococcus senticosus]
          Length = 1387

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = -2

Query: 274  EMRDILFHHRKFFDSFLSKNFHDRPEQSFIGLNDS 170
            EMRDILFHHRKFFDS LSKNFHD PEQSFIG NDS
Sbjct: 1353 EMRDILFHHRKFFDSCLSKNFHDTPEQSFIGFNDS 1387


>ref|YP_086956.2| RNA polymerase beta'' subunit [Panax ginseng]
          Length = 1383

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = -2

Query: 274  EMRDILFHHRKFFDSFLSKNFHDRPEQSFIGLNDS 170
            EMRDILFHHRKFFDS LSKNFHD PEQSFIG NDS
Sbjct: 1349 EMRDILFHHRKFFDSCLSKNFHDTPEQSFIGFNDS 1383


>ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) [Salvia miltiorrhiza]
            gi|401879732|gb|AFQ30919.1| RNA polymerase beta subunit-2
            (chloroplast) [Salvia miltiorrhiza]
          Length = 1395

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = -2

Query: 274  EMRDILFHHRKFFDSFLSKNFHDRPEQSFIGLNDS 170
            EMRDILFHHRK FDS  SKNFHDRPEQ+FIG NDS
Sbjct: 1361 EMRDILFHHRKLFDSLFSKNFHDRPEQAFIGFNDS 1395