BLASTX nr result

ID: Scutellaria23_contig00032671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00032671
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324476.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
ref|XP_003606459.1| Pentatricopeptide repeat-containing protein ...   127   1e-27
ref|NP_180348.2| pentatricopeptide repeat-containing protein [Ar...   121   5e-26

>ref|XP_002324476.1| predicted protein [Populus trichocarpa] gi|222865910|gb|EEF03041.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  141 bits (356), Expect = 5e-32
 Identities = 65/82 (79%), Positives = 74/82 (90%)
 Frame = -1

Query: 261 PLVCFELFNWASQQHRFRHNVITYHITIKKLGAARMYEEMDCIVNQVLAVPSIGSEALYN 82
           PLVC ELFNWASQQHRFRH+  TYH+TIKKLG A+MY+EMD +VNQ+LAVP IG+EALYN
Sbjct: 139 PLVCLELFNWASQQHRFRHDASTYHVTIKKLGIAKMYQEMDDVVNQLLAVPHIGNEALYN 198

Query: 81  TIIYYFTEARKLVRAVNIYKHM 16
           +IIYYFTEARKL RAVNI+K M
Sbjct: 199 SIIYYFTEARKLTRAVNIFKRM 220


>ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like [Cucumis sativus]
          Length = 428

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/82 (79%), Positives = 72/82 (87%)
 Frame = -1

Query: 261 PLVCFELFNWASQQHRFRHNVITYHITIKKLGAARMYEEMDCIVNQVLAVPSIGSEALYN 82
           PLVCFELFNWASQQ RFRH+  +Y ITIKKLG A+MYEEMD +VNQ LAV SIGSE LYN
Sbjct: 133 PLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYN 192

Query: 81  TIIYYFTEARKLVRAVNIYKHM 16
           T+IY+FTEARKL RAVNI+KHM
Sbjct: 193 TMIYFFTEARKLTRAVNIFKHM 214


>ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like [Cucumis sativus]
          Length = 428

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/82 (79%), Positives = 72/82 (87%)
 Frame = -1

Query: 261 PLVCFELFNWASQQHRFRHNVITYHITIKKLGAARMYEEMDCIVNQVLAVPSIGSEALYN 82
           PLVCFELFNWASQQ RFRH+  +Y ITIKKLG A+MYEEMD +VNQ LAV SIGSE LYN
Sbjct: 133 PLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYN 192

Query: 81  TIIYYFTEARKLVRAVNIYKHM 16
           T+IY+FTEARKL RAVNI+KHM
Sbjct: 193 TMIYFFTEARKLTRAVNIFKHM 214


>ref|XP_003606459.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355507514|gb|AES88656.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 418

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/82 (71%), Positives = 71/82 (86%)
 Frame = -1

Query: 261 PLVCFELFNWASQQHRFRHNVITYHITIKKLGAARMYEEMDCIVNQVLAVPSIGSEALYN 82
           PLVC ELF+WAS Q RFRHN  ++H+TIKKLG A+MY+EMD +VNQ+LAV SIG+EAL+N
Sbjct: 110 PLVCLELFHWASHQPRFRHNESSFHVTIKKLGDAKMYQEMDDVVNQLLAVRSIGNEALFN 169

Query: 81  TIIYYFTEARKLVRAVNIYKHM 16
            IIYYFTEARKL RAV ++KHM
Sbjct: 170 MIIYYFTEARKLTRAVIVFKHM 191


>ref|NP_180348.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546772|sp|Q9ZUY1.2|PP173_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g27800, mitochondrial; Flags: Precursor
           gi|330252952|gb|AEC08046.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 442

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/82 (68%), Positives = 69/82 (84%)
 Frame = -1

Query: 261 PLVCFELFNWASQQHRFRHNVITYHITIKKLGAARMYEEMDCIVNQVLAVPSIGSEALYN 82
           P +CF LFNWASQQ RF H   +YHI I+KLGAA+MY+EMD IVNQVL+V  IG+E LYN
Sbjct: 152 PFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYN 211

Query: 81  TIIYYFTEARKLVRAVNIYKHM 16
           +II+YFT+A KL+RAVNI++HM
Sbjct: 212 SIIFYFTKAGKLIRAVNIFRHM 233


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