BLASTX nr result
ID: Scutellaria23_contig00032479
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria23_contig00032479
(488 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containi... 93 2e-17
ref|XP_002870213.1| pentatricopeptide repeat-containing protein ... 91 1e-16
ref|NP_001050194.1| Os03g0369700 [Oryza sativa Japonica Group] g... 89 3e-16
ref|NP_190486.2| pentatricopeptide repeat-containing protein [Ar... 88 6e-16
emb|CAB66396.1| putative protein [Arabidopsis thaliana] 88 6e-16
>ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Glycine max]
Length = 722
Score = 93.2 bits (230), Expect = 2e-17
Identities = 43/112 (38%), Positives = 72/112 (64%)
Frame = -1
Query: 344 SLSRLIRSATEKNSIFKAKLIHARLVVYGSDSDVQTGNHLLTMYSKLGDIDYAQKLFDGM 165
SLS ++ + +++ K +H ++ +G S+V GN L+TMY+K G +D A ++FD M
Sbjct: 478 SLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAM 537
Query: 164 LVRNLVTWTSLISAYSQTGLPEKALNCFRSMILDDGINPNDYTYVAALSACA 9
+ R+ +TW ++ISAY+Q G E+A+ CF +M GI P+ T+ + LSAC+
Sbjct: 538 VERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACS 589
Score = 56.6 bits (135), Expect = 2e-06
Identities = 27/77 (35%), Positives = 48/77 (62%)
Frame = -1
Query: 245 VQTGNHLLTMYSKLGDIDYAQKLFDGMLVRNLVTWTSLISAYSQTGLPEKALNCFRSMIL 66
V N ++TMYS G++ Q +F+GM R++V+W ++S + Q L E+A+ + M
Sbjct: 313 VAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEAMLSYLKM-R 371
Query: 65 DDGINPNDYTYVAALSA 15
+GI P+++TY + L+A
Sbjct: 372 REGIEPDEFTYGSLLAA 388
>ref|XP_002870213.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297316049|gb|EFH46472.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 608
Score = 90.5 bits (223), Expect = 1e-16
Identities = 45/123 (36%), Positives = 71/123 (57%)
Frame = -1
Query: 377 PKNREETSQRMSLSRLIRSATEKNSIFKAKLIHARLVVYGSDSDVQTGNHLLTMYSKLGD 198
P N+ E + + L+ +E +F L+HA + G S+ T NHL+ Y KL +
Sbjct: 13 PHNQNEFFYLKTKAFLVHKLSEPTDLFLTNLLHALTLKLGFASNTFTVNHLVNSYVKLKE 72
Query: 197 IDYAQKLFDGMLVRNLVTWTSLISAYSQTGLPEKALNCFRSMILDDGINPNDYTYVAALS 18
I+ A+K+FD M N+V+WTS+IS Y+ G P+ AL+ F+ M D + PN+YT+ +
Sbjct: 73 INTARKVFDEMCEPNVVSWTSVISGYNDMGQPQTALSMFQEMHEDRSVPPNEYTFASVFK 132
Query: 17 ACA 9
AC+
Sbjct: 133 ACS 135
Score = 66.2 bits (160), Expect = 3e-09
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 13/114 (11%)
Frame = -1
Query: 305 SIFKA----------KLIHARLVVYGSDSDVQTGNHLLTMYSKLGDIDYAQKLFDGML-- 162
S+FKA K IHARL V G ++ + L+ MY K D++ A+++FD M+
Sbjct: 129 SVFKACSALAESRIGKNIHARLEVSGLRRNIVVSSSLVDMYGKCNDVEMARRVFDSMIGY 188
Query: 161 VRNLVTWTSLISAYSQTGLPEKALNCFRSMILDD-GINPNDYTYVAALSACAQV 3
RN+V+WTS+I+AY+Q +A+ FRS D PN + + ++A + +
Sbjct: 189 GRNVVSWTSMITAYAQNARGHEAIELFRSFNADSTSDRPNQFMLASVINASSSL 242
Score = 55.8 bits (133), Expect = 4e-06
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Frame = -1
Query: 371 NREETSQRMS---LSRLIRSATEKNSIFKAKLIHARLVVYGSDSDVQTGNHLLTMYSKLG 201
N + TS R + L+ +I +++ + ++ H + G +S+ LL MY+K G
Sbjct: 219 NADSTSDRPNQFMLASVINASSSLGRLQWGQISHGLVTRGGYESNNVVATSLLDMYAKCG 278
Query: 200 DIDYAQKLFDGMLVRNLVTWTSLISAYSQTGLPEKALNCFRSMILDDGINPNDYTYVAAL 21
+ A+K+F + +++++TS+I A ++ GL E AL F M+ I PN T + L
Sbjct: 279 SLTCAEKIFFRIRCHSVISYTSMIMAKAKHGLGEAALQLFDEMVA-GRIKPNYVTLLGVL 337
Query: 20 SACA 9
AC+
Sbjct: 338 HACS 341
>ref|NP_001050194.1| Os03g0369700 [Oryza sativa Japonica Group]
gi|12039352|gb|AAG46139.1|AC082644_21 hypothetical
protein [Oryza sativa Japonica Group]
gi|108708369|gb|ABF96164.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|113548665|dbj|BAF12108.1| Os03g0369700 [Oryza sativa
Japonica Group] gi|125544037|gb|EAY90176.1| hypothetical
protein OsI_11741 [Oryza sativa Indica Group]
gi|125586399|gb|EAZ27063.1| hypothetical protein
OsJ_10992 [Oryza sativa Japonica Group]
Length = 513
Score = 89.4 bits (220), Expect = 3e-16
Identities = 41/95 (43%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
Frame = -1
Query: 284 IHARLVVYGSDSDVQTGNHLLTMYSKLGDIDYAQKLFDGMLVRNLVTWTSLISAYSQTGL 105
+H +++ SD++ G+ LL MYSK G +D +++FD M RN++TWTS+I Y + GL
Sbjct: 282 VHCQVIKSSLSSDIKAGSALLDMYSKCGRVDDGRRIFDRMAERNVITWTSMIDGYGKNGL 341
Query: 104 PEKALNCFRSMIL--DDGINPNDYTYVAALSACAQ 6
++AL F M+ DD I PN T+++ALSACA+
Sbjct: 342 SDEALQLFEQMLRRHDDAIRPNHATFLSALSACAR 376
>ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261
[Arabidopsis thaliana] gi|58013020|gb|AAW62963.1|
embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 88.2 bits (217), Expect = 6e-16
Identities = 47/128 (36%), Positives = 74/128 (57%)
Frame = -1
Query: 386 LDEPKNREETSQRMSLSRLIRSATEKNSIFKAKLIHARLVVYGSDSDVQTGNHLLTMYSK 207
L E RE + + L+ SI K + IH+++V G + N L++MYSK
Sbjct: 462 LSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSK 521
Query: 206 LGDIDYAQKLFDGMLVRNLVTWTSLISAYSQTGLPEKALNCFRSMILDDGINPNDYTYVA 27
G ID A ++F+ M RN+++WTS+I+ +++ G + L F MI ++G+ PN+ TYVA
Sbjct: 522 CGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI-EEGVKPNEVTYVA 580
Query: 26 ALSACAQV 3
LSAC+ V
Sbjct: 581 ILSACSHV 588
Score = 68.2 bits (165), Expect = 7e-10
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Frame = -1
Query: 347 MSLSRLIRSATEKNSIFKAKLIHARLVVYGSDSDVQTGNHLLTMYSKLGDIDYAQKLFDG 168
++ S L++S KL+HARL+ + + D N L+++YSK GD A+ +F+
Sbjct: 63 VTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 167 ML---VRNLVTWTSLISAYSQTGLPEKALNCFRSMILDDGINPNDYTYVAALSACA 9
M R++V+W+++++ Y G A+ F L+ G+ PNDY Y A + AC+
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVE-FLELGLVPNDYCYTAVIRACS 177
Score = 62.8 bits (151), Expect = 3e-08
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Frame = -1
Query: 356 SQRMSLSRLIRSATEKNSIFKAKLIHARLVVYGSDSDVQTGNHLLTMYSKL---GDIDYA 186
S + +LS + + E ++ K +H+ + G DV+ L+ MY+K G +D
Sbjct: 267 SDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDC 324
Query: 185 QKLFDGMLVRNLVTWTSLISAYSQT-GLPEKALNCFRSMILDDGINPNDYTYVAALSACA 9
+K+FD M ++++WT+LI+ Y + L +A+N F MI + PN +T+ +A AC
Sbjct: 325 RKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384
Query: 8 QV 3
+
Sbjct: 385 NL 386
>emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 88.2 bits (217), Expect = 6e-16
Identities = 47/128 (36%), Positives = 74/128 (57%)
Frame = -1
Query: 386 LDEPKNREETSQRMSLSRLIRSATEKNSIFKAKLIHARLVVYGSDSDVQTGNHLLTMYSK 207
L E RE + + L+ SI K + IH+++V G + N L++MYSK
Sbjct: 462 LSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSK 521
Query: 206 LGDIDYAQKLFDGMLVRNLVTWTSLISAYSQTGLPEKALNCFRSMILDDGINPNDYTYVA 27
G ID A ++F+ M RN+++WTS+I+ +++ G + L F MI ++G+ PN+ TYVA
Sbjct: 522 CGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI-EEGVKPNEVTYVA 580
Query: 26 ALSACAQV 3
LSAC+ V
Sbjct: 581 ILSACSHV 588
Score = 68.2 bits (165), Expect = 7e-10
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Frame = -1
Query: 347 MSLSRLIRSATEKNSIFKAKLIHARLVVYGSDSDVQTGNHLLTMYSKLGDIDYAQKLFDG 168
++ S L++S KL+HARL+ + + D N L+++YSK GD A+ +F+
Sbjct: 63 VTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 167 ML---VRNLVTWTSLISAYSQTGLPEKALNCFRSMILDDGINPNDYTYVAALSACA 9
M R++V+W+++++ Y G A+ F L+ G+ PNDY Y A + AC+
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVE-FLELGLVPNDYCYTAVIRACS 177
Score = 62.8 bits (151), Expect = 3e-08
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Frame = -1
Query: 356 SQRMSLSRLIRSATEKNSIFKAKLIHARLVVYGSDSDVQTGNHLLTMYSKL---GDIDYA 186
S + +LS + + E ++ K +H+ + G DV+ L+ MY+K G +D
Sbjct: 267 SDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDC 324
Query: 185 QKLFDGMLVRNLVTWTSLISAYSQT-GLPEKALNCFRSMILDDGINPNDYTYVAALSACA 9
+K+FD M ++++WT+LI+ Y + L +A+N F MI + PN +T+ +A AC
Sbjct: 325 RKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384
Query: 8 QV 3
+
Sbjct: 385 NL 386