BLASTX nr result

ID: Scutellaria23_contig00032444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00032444
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16890.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]   105   5e-21
ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_002532893.1| pentatricopeptide repeat-containing protein,...    84   9e-15

>emb|CBI16890.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/79 (67%), Positives = 63/79 (79%)
 Frame = -1

Query: 290 GDTIVYTSLAYAYFSAGDAISASALLDEMYKRRLMVTFKIFRSISASYAKDGTNLDIFWD 111
           GD++VYTSLAYAYF AG AI+AS +LDEM KRRLM+T KI+R  SASYA DG+ L +FWD
Sbjct: 501 GDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLFWD 560

Query: 110 TLSERGLISKPIYKQIQQM 54
            + ER LISK I K IQQ+
Sbjct: 561 HVIERRLISKNILKYIQQL 579


>ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/79 (67%), Positives = 63/79 (79%)
 Frame = -1

Query: 290 GDTIVYTSLAYAYFSAGDAISASALLDEMYKRRLMVTFKIFRSISASYAKDGTNLDIFWD 111
           GD++VYTSLAYAYF AG AI+AS +LDEM KRRLM+T KI+R  SASYA DG+ L +FWD
Sbjct: 508 GDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLFWD 567

Query: 110 TLSERGLISKPIYKQIQQM 54
            + ER LISK I K IQQ+
Sbjct: 568 HVIERRLISKNILKYIQQL 586


>emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/79 (67%), Positives = 63/79 (79%)
 Frame = -1

Query: 290 GDTIVYTSLAYAYFSAGDAISASALLDEMYKRRLMVTFKIFRSISASYAKDGTNLDIFWD 111
           GD++VYTSLAYAYF AG AI+AS +LDEM KRRLM+T KI+R  SASYA DG+ L +FWD
Sbjct: 508 GDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLFWD 567

Query: 110 TLSERGLISKPIYKQIQQM 54
            + ER LISK I K IQQ+
Sbjct: 568 HVIERRLISKNILKYIQQL 586


>ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|222870764|gb|EEF07895.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/77 (54%), Positives = 56/77 (72%)
 Frame = -1

Query: 290 GDTIVYTSLAYAYFSAGDAISASALLDEMYKRRLMVTFKIFRSISASYAKDGTNLDIFWD 111
           GD++VYTSLAY Y+  G     S +LDEMYK+RLM+T KI+RS +ASYA D + L +FW+
Sbjct: 517 GDSVVYTSLAYGYWKVGKVNVTSDILDEMYKKRLMITLKIYRSFNASYASDNSILSLFWN 576

Query: 110 TLSERGLISKPIYKQIQ 60
            + ER L+SK I K +Q
Sbjct: 577 HVLERRLMSKNILKDMQ 593


>ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527353|gb|EEF29498.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 625

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 38/61 (62%), Positives = 51/61 (83%)
 Frame = -1

Query: 293 LGDTIVYTSLAYAYFSAGDAISASALLDEMYKRRLMVTFKIFRSISASYAKDGTNLDIFW 114
           LGD+++YTSLAYAY+  G A +AS LLDEMYKRRLM+T KI+R+++ASYA D + L +FW
Sbjct: 510 LGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRALNASYAGDNSILSLFW 569

Query: 113 D 111
           +
Sbjct: 570 N 570


Top