BLASTX nr result

ID: Scutellaria23_contig00032406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00032406
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
emb|CBI23347.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002527978.1| pentatricopeptide repeat-containing protein,...    64   2e-08

>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/81 (45%), Positives = 48/81 (59%)
 Frame = -2

Query: 256 DRLKTMXXXXXXXXXXXSNIILETVYHSDVNVIRALCLEGKLGPALWIWRTMVRQLKIPD 77
           +RLK M           +   LE  Y   V +IR LCLEGKL  ALW+   M+++  IPD
Sbjct: 106 ERLKMMRESVSLTKIGLNGCTLEMDYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPD 165

Query: 76  VVTHNYIVNALCKSGGLGTAE 14
           V+THNY+VN LCK+G L  A+
Sbjct: 166 VLTHNYLVNGLCKAGDLEKAD 186


>emb|CBI23347.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/60 (55%), Positives = 42/60 (70%)
 Frame = -2

Query: 193 LETVYHSDVNVIRALCLEGKLGPALWIWRTMVRQLKIPDVVTHNYIVNALCKSGGLGTAE 14
           LE  Y   V +IR LCLEGKL  ALW+   M+++  IPDV+THNY+VN LCK+G L  A+
Sbjct: 20  LEMDYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKAD 79


>ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Glycine max]
          Length = 577

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/62 (50%), Positives = 40/62 (64%)
 Frame = -2

Query: 190 ETVYHSDVNVIRALCLEGKLGPALWIWRTMVRQLKIPDVVTHNYIVNALCKSGGLGTAEW 11
           E+ Y  D   IR LCL+GKLG A+W+W  M ++  + DV THN+IVN LCK G L  A+ 
Sbjct: 116 ESKYAEDTATIRRLCLDGKLGAAVWLWGKMAQKGVVSDVFTHNHIVNGLCKIGLLDKADL 175

Query: 10  FV 5
            V
Sbjct: 176 VV 177


>ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|222874911|gb|EEF12042.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = -2

Query: 163 VIRALCLEGKLGPALWIWRTMVRQLKIPDVVTHNYIVNALCKSGGLGTAEWFV 5
           +I+ LCL GKLGPALW+   M+++  +PDV+THNY+VN LCK   L  A+W +
Sbjct: 70  IIKDLCLGGKLGPALWLRSKMIQKGFVPDVLTHNYMVNGLCKMIELEKADWLI 122


>ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532604|gb|EEF34390.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 621

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/64 (40%), Positives = 43/64 (67%)
 Frame = -2

Query: 193 LETVYHSDVNVIRALCLEGKLGPALWIWRTMVRQLKIPDVVTHNYIVNALCKSGGLGTAE 14
           ++  Y    +++R LCL GKLG ALW+ R ++ +  +PD++THN++VN LC SG L  A+
Sbjct: 121 VDVSYAGHASLVRDLCLAGKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKAD 180

Query: 13  WFVE 2
             ++
Sbjct: 181 CLIK 184


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