BLASTX nr result
ID: Scutellaria23_contig00032394
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria23_contig00032394
(828 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containi... 231 1e-58
ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|2... 228 2e-57
ref|XP_002528578.1| pentatricopeptide repeat-containing protein,... 223 4e-56
ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containi... 196 4e-48
ref|NP_196771.1| pentatricopeptide repeat-containing protein [Ar... 190 3e-46
>ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 231 bits (590), Expect = 1e-58
Identities = 112/214 (52%), Positives = 154/214 (71%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLVEKIIEEMS 648
TYN+LISG+S+AGN++K L+LY+ M +GIKPTLNT+H LI+ K+ LVEKI +EM
Sbjct: 604 TYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEML 663
Query: 647 QMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQ 468
QM+L PDRV+YN LI C+V H ++QKA L++ M +GI PDKMTYN LI G K G +
Sbjct: 664 QMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMH 723
Query: 467 GARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLL 288
++L ++M ++GL P T++ LI HCKLKD DGAY+WY+EM + GF P VS+C+ L+
Sbjct: 724 KVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLI 783
Query: 287 SGLREEGRFEEAETISSEISVKGVNKSSLHGDLS 186
+GLREEGR +A+ I SE+++KG + D S
Sbjct: 784 TGLREEGRSHDADVICSEMNMKGKDDCRADEDAS 817
Score = 103 bits (256), Expect = 6e-20
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 1/205 (0%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEM 651
TYNTLI G+ G LE+ ++ ++M ++PT+ TF+SL++ + + ++++EEM
Sbjct: 254 TYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEM 313
Query: 650 SQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNL 471
PDR Y L + N+ + L + + KG+ T + L+ K GN+
Sbjct: 314 EVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNM 373
Query: 470 QGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKL 291
+ A ++ + + GL+P FNT++ +C++ DI+ AY ++M G P N L
Sbjct: 374 EKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSL 433
Query: 290 LSGLREEGRFEEAETISSEISVKGV 216
+ E EEAE ++ KGV
Sbjct: 434 VKKFCEMKNMEEAEKCIKKMVEKGV 458
Score = 103 bits (256), Expect = 6e-20
Identities = 58/205 (28%), Positives = 109/205 (53%), Gaps = 1/205 (0%)
Frame = -2
Query: 824 YNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIF-EKDRPDLVEKIIEEMS 648
+NT+++G+ G++ K +KM G++P T++SL+ F E + EK I++M
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMV 454
Query: 647 QMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQ 468
+ + P+ YN LI + + + +M KG+ P+ ++Y LI K N+
Sbjct: 455 EKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANIL 514
Query: 467 GARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLL 288
A + +M+ +G+ PN +N LI+ C + A+ ++ EM+ P + N L+
Sbjct: 515 EAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILI 574
Query: 287 SGLREEGRFEEAETISSEISVKGVN 213
+GL ++G+ EAE ++SEI+ KG++
Sbjct: 575 NGLCKKGKVMEAENLASEITRKGLS 599
Score = 100 bits (249), Expect = 4e-19
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 1/205 (0%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRP-DLVEKIIEEM 651
TYN+L+ F N+E+ KKM G+ P + T+++LI + + D +I+EEM
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM 488
Query: 650 SQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNL 471
+ L P+ + Y LI C NI +A + DM+++G+ P+ YN LI G G L
Sbjct: 489 EKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKL 548
Query: 470 QGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKL 291
+ A FDEM+ + + P T+N LI CK + A E+ + G V N L
Sbjct: 549 KDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSL 608
Query: 290 LSGLREEGRFEEAETISSEISVKGV 216
+SG G ++A + + G+
Sbjct: 609 ISGYSSAGNVQKALELYETMKKSGI 633
Score = 97.8 bits (242), Expect = 3e-18
Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDL-VEKIIEEM 651
TYNTLI G+ + ++C + ++M G+KP + ++ LI+ KD L E I+ +M
Sbjct: 464 TYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDM 523
Query: 650 SQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNL 471
+ P+ +YN LI ++ A + +M+ + I P +TYN LI G K G +
Sbjct: 524 VHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKV 583
Query: 470 QGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKL 291
A +L E+ KGLS + T+N+LI + ++ A Y+ M K+G P ++ ++L
Sbjct: 584 MEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRL 643
Query: 290 LSGLREEG 267
++G +EG
Sbjct: 644 IAGCGKEG 651
Score = 93.2 bits (230), Expect = 6e-17
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 1/200 (0%)
Frame = -2
Query: 815 LISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLI-SIFEKDRPDLVEKIIEEMSQMD 639
L+S S + + + +LY M G+ P++ + + + S+ R + ++ E+ +
Sbjct: 118 LLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESG 177
Query: 638 LTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGAR 459
L PD+ +Y + IQ V ++++A L T M G+ P YN +I G K ++ A
Sbjct: 178 LRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAE 237
Query: 458 DLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGL 279
LFDEM+ + ++PN T+NTLI+ +CK+ ++ A+ + M P + N LL+GL
Sbjct: 238 KLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGL 297
Query: 278 REEGRFEEAETISSEISVKG 219
EEA+ + E+ V G
Sbjct: 298 CRAQMMEEAQRVLEEMEVYG 317
Score = 87.4 bits (215), Expect = 3e-15
Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
Frame = -2
Query: 824 YNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEMS 648
Y I G+L++ ++L M G+ P + ++ +I + ++ R EK+ +EM
Sbjct: 185 YGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEML 244
Query: 647 QMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQ 468
+ P+R+ YN LI + +++A + M + + P +T+NSL+ G + ++
Sbjct: 245 DRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMME 304
Query: 467 GARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLL 288
A+ + +EM V G P+ T+ TL + H K ++D + +E ++ G C+ LL
Sbjct: 305 EAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILL 364
Query: 287 SGLREEGRFEEAETISSEISVKGV 216
+ L +EG E+AE + + G+
Sbjct: 365 NALCKEGNMEKAEEVLKKFLENGL 388
Score = 81.6 bits (200), Expect = 2e-13
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKD-RPDLVEKIIEEM 651
TY TL G GN++ + L ++ G++ T L++ K+ + E+++++
Sbjct: 324 TYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKF 383
Query: 650 SQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNL 471
+ L P V +N ++ + +I KA M G+ P+ +TYNSL+ +M N+
Sbjct: 384 LENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNM 443
Query: 470 QGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKL 291
+ A +M+ KG+ PN T+NTLI+ + + D + +EM K G P V L
Sbjct: 444 EEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCL 503
Query: 290 LSGLREEGRFEEAETISSEISVKGV 216
++ L ++ EAE I ++ +GV
Sbjct: 504 INCLCKDANILEAEVILGDMVHRGV 528
>ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|222865491|gb|EEF02622.1|
predicted protein [Populus trichocarpa]
Length = 707
Score = 228 bits (580), Expect = 2e-57
Identities = 110/214 (51%), Positives = 150/214 (70%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLVEKIIEEMS 648
TYN+LISG+SNAGN +KCL+LY+ M G+KPT+NTFH LIS K+ L E + EM
Sbjct: 489 TYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEML 548
Query: 647 QMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQ 468
QM+L+PDRVVYN +I C+ ++QKA L +M++ G+ PD TYNSLI G LK G L
Sbjct: 549 QMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLS 608
Query: 467 GARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLL 288
+DL D+M KGL P T++ LI+ HC LKD +GAY+WY+EML+ GF P V +CN+L
Sbjct: 609 ETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELS 668
Query: 287 SGLREEGRFEEAETISSEISVKGVNKSSLHGDLS 186
+GLR++GR +EA++I SE+ G++ + DLS
Sbjct: 669 TGLRKDGRLQEAQSICSEMIANGMDNLDTNEDLS 702
Score = 95.1 bits (235), Expect = 2e-17
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Frame = -2
Query: 815 LISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLI-SIFEKDRPDLVEKIIEEMSQMD 639
L+S S + + +LY M G P+ ++ S+ E + D V + +EM +
Sbjct: 2 LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLG 61
Query: 638 LTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGAR 459
PD++VY + V +++ A L+ M + + P+ YN LI G K ++ A
Sbjct: 62 FRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAE 121
Query: 458 DLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGL 279
LF EM V+ L PN TFNTLI+ +CK ++D A + M K P + N LLSGL
Sbjct: 122 KLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGL 181
Query: 278 REEGRFEEAETISSEISVKG 219
+ R EEA + +EI G
Sbjct: 182 CKARRIEEARCMLNEIKCNG 201
Score = 91.3 bits (225), Expect = 2e-16
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDL-VEKIIEEM 651
TYN LI G+ +C + ++M G KP + ++ SLI+ KD L E ++ +M
Sbjct: 349 TYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDM 408
Query: 650 SQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNL 471
+ P+ +YN LI +++A + +M GI +TYNSLI G KMG L
Sbjct: 409 VGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKL 468
Query: 470 QGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKL 291
+ A ++F + G P+ T+N+LI + + Y+ M K G P ++ + L
Sbjct: 469 KEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPL 528
Query: 290 LSGLREEGRFEEAETISSEI 231
+SG +EG + ET+ +E+
Sbjct: 529 ISGCSKEG-IKLKETLFNEM 547
Score = 90.1 bits (222), Expect = 5e-16
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 6/196 (3%)
Frame = -2
Query: 824 YNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS------IFEKDRPDLVEKI 663
+N++I F ++K + KKM GI P++ T++ LI +F + +I
Sbjct: 315 FNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSR-----CFQI 369
Query: 662 IEEMSQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLK 483
+EEM + P+ + Y LI C I +A + DM+ +G+ P+ YN LI G
Sbjct: 370 LEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCT 429
Query: 482 MGNLQGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSV 303
+G L+ A FDEM G+ T+N+LI+ CK+ + A + + TG P V
Sbjct: 430 VGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVIT 489
Query: 302 CNKLLSGLREEGRFEE 255
N L+SG G ++
Sbjct: 490 YNSLISGYSNAGNSQK 505
Score = 89.7 bits (221), Expect = 7e-16
Identities = 53/209 (25%), Positives = 106/209 (50%), Gaps = 2/209 (0%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEM 651
T+NTLI G+ AG ++ + L ++M ++P++ TF+SL+S + + R + ++ E+
Sbjct: 138 TFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEI 197
Query: 650 SQMDLTPDRVVYNELIQCFVCHDNIQKASF-LYTDMLNKGIPPDKMTYNSLITGQLKMGN 474
PD Y+ + + D+ A+ LY + + KG+ D T + L+ G K G
Sbjct: 198 KCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGK 257
Query: 473 LQGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNK 294
++ A ++ ++ GL P + +NT++ +C++ D+D A + ++M G P N
Sbjct: 258 VEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNS 317
Query: 293 LLSGLREEGRFEEAETISSEISVKGVNKS 207
++ E ++AE ++ KG+ S
Sbjct: 318 VIDKFCEMQMIDKAEEWVKKMVGKGIAPS 346
Score = 80.1 bits (196), Expect = 6e-13
Identities = 54/194 (27%), Positives = 100/194 (51%), Gaps = 2/194 (1%)
Frame = -2
Query: 791 GNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEMSQMDLTPDRVVY 615
G+L+ ++L++ M + P + ++ LI + ++ R EK+ EMS +L P+RV +
Sbjct: 80 GDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTF 139
Query: 614 NELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIV 435
N LI + + A L M + + P +T+NSL++G K ++ AR + +E+
Sbjct: 140 NTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKC 199
Query: 434 KGLSPNDGTFNTLIEWHCKLKDIDGAYM-WYKEMLKTGFWPCVSVCNKLLSGLREEGRFE 258
G P+ T++ + + K D GA + Y+E + G C+ LL+GL +EG+ E
Sbjct: 200 NGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVE 259
Query: 257 EAETISSEISVKGV 216
+AE + + G+
Sbjct: 260 KAEEVLKSLVEHGL 273
Score = 79.7 bits (195), Expect = 7e-13
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 4/208 (1%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS----IFEKDRPDLVEKII 660
T + L++G G +EK ++ K + G+ P ++++++ I + DR L I
Sbjct: 244 TCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILT---I 300
Query: 659 EEMSQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKM 480
E+M L P+ + +N +I F I KA M+ KGI P TYN LI G ++
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRL 360
Query: 479 GNLQGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVC 300
+ +EM G PN ++ +LI CK I A M ++M+ G P ++
Sbjct: 361 CVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIY 420
Query: 299 NKLLSGLREEGRFEEAETISSEISVKGV 216
N L+ G G+ EA E+S G+
Sbjct: 421 NMLIDGSCTVGKLREALRFFDEMSKNGI 448
Score = 68.9 bits (167), Expect = 1e-09
Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 2/210 (0%)
Frame = -2
Query: 824 YNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEK-DRPDLVEKIIEEMS 648
YN LI G + L+ +M+ + P TF++LI + K D+ + E M
Sbjct: 104 YNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMK 163
Query: 647 QMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQ 468
+ + P + +N L+ I++A + ++ G PD TY+ + G LK +
Sbjct: 164 KEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGA 223
Query: 467 GAR-DLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKL 291
GA DL+ E I KG+ ++ T + L+ CK ++ A K +++ G P + N +
Sbjct: 224 GAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTI 283
Query: 290 LSGLREEGRFEEAETISSEISVKGVNKSSL 201
++G + G + A ++ +G+ + +
Sbjct: 284 VNGYCQIGDMDRAILTIEQMESRGLRPNCI 313
>ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531974|gb|EEF33786.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 817
Score = 223 bits (568), Expect = 4e-56
Identities = 106/204 (51%), Positives = 143/204 (70%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLVEKIIEEMS 648
TYN+LISG++NAGN+ KCL LY+ M GIKPT+ T+H LIS K+ +LVEK+ EM
Sbjct: 598 TYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEML 657
Query: 647 QMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQ 468
QM+L PDRVVYN +I C+ N QKA L+ ML++GI PDKMTYNSLI G + G L
Sbjct: 658 QMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLS 717
Query: 467 GARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLL 288
+DL + M K L+P T++ L++ HC LKD GAY+WY+EM++ F P S+CN+L
Sbjct: 718 NIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELT 777
Query: 287 SGLREEGRFEEAETISSEISVKGV 216
+GL +EGR +E + I SE++VKG+
Sbjct: 778 AGLEQEGRLQEVQVICSEMNVKGI 801
Score = 101 bits (251), Expect = 2e-19
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 1/203 (0%)
Frame = -2
Query: 824 YNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIF-EKDRPDLVEKIIEEMS 648
YNT ++G+ G++ K + ++M + G++P TF+SLI F + D E+ +++M+
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMA 448
Query: 647 QMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQ 468
+ +TP YN LI + + + M G+ P+ ++Y SLI K G +
Sbjct: 449 EKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKIL 508
Query: 467 GARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLL 288
A + +MI +G+ PN +N LI+ C + + A ++ EM+++ P + N L+
Sbjct: 509 EAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLI 568
Query: 287 SGLREEGRFEEAETISSEISVKG 219
GL ++G+ EAE ++I+ G
Sbjct: 569 DGLCKKGKLTEAEDFLTQITSSG 591
Score = 100 bits (248), Expect = 5e-19
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRP-DLVEKIIEEM 651
T+N+LI F + ++K + KKM G+ P++ T+++LI + K D +I+E+M
Sbjct: 423 TFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQM 482
Query: 650 SQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNL 471
++ + P+ V Y LI C I +A + DM+ +G+ P+ YN LI G +G +
Sbjct: 483 EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKV 542
Query: 470 QGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKL 291
+ A FDEM+ +SP T+N LI+ CK + A + ++ +G P V N L
Sbjct: 543 KDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSL 602
Query: 290 LSGLREEG 267
+SG G
Sbjct: 603 ISGYANAG 610
Score = 97.1 bits (240), Expect = 4e-18
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDL-VEKIIEEM 651
TYNTLI G+ ++C + ++M G+KP + ++ SLI+ KD L E ++ +M
Sbjct: 458 TYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDM 517
Query: 650 SQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNL 471
+ P+ VYN LI ++ A + +M+ I P +TYN LI G K G L
Sbjct: 518 ICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKL 577
Query: 470 QGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKL 291
A D ++ G SP+ T+N+LI + ++ Y+ M G P V + L
Sbjct: 578 TEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPL 637
Query: 290 LSGLREEGRFEEAETISSEI 231
+SG +EG E E + +E+
Sbjct: 638 ISGCSKEG-IELVEKLYNEM 656
Score = 85.9 bits (211), Expect = 1e-14
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 1/208 (0%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRP-DLVEKIIEEM 651
TYNTLI G+ G L+ + ++M + P + TF+SL+S K R +++EM
Sbjct: 248 TYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEM 307
Query: 650 SQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNL 471
PD Y+ L + D+ A LY KGI + T + L+ G K G +
Sbjct: 308 EVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKV 367
Query: 470 QGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKL 291
+ A ++ + GL ++ +NT + +C++ D++ A + + M G P N L
Sbjct: 368 EKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSL 427
Query: 290 LSGLREEGRFEEAETISSEISVKGVNKS 207
+ + ++AE +++ KGV S
Sbjct: 428 IDKFCDMKEMDKAEEWVKKMAEKGVTPS 455
Score = 84.0 bits (206), Expect = 4e-14
Identities = 53/205 (25%), Positives = 105/205 (51%), Gaps = 1/205 (0%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEM 651
TY+ L G + ++LY++ GI+ T L++ + ++ + + E+I+++
Sbjct: 318 TYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKF 377
Query: 650 SQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNL 471
++ L D V+YN + + ++ KA M + G+ P+ +T+NSLI M +
Sbjct: 378 TENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEM 437
Query: 470 QGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKL 291
A + +M KG++P+ T+NTLI+ + KL D + ++M + G P V L
Sbjct: 438 DKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSL 497
Query: 290 LSGLREEGRFEEAETISSEISVKGV 216
++ L ++G+ EAE + ++ +GV
Sbjct: 498 INCLCKDGKILEAEIVLRDMICRGV 522
Score = 82.8 bits (203), Expect = 9e-14
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 1/200 (0%)
Frame = -2
Query: 815 LISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDL-VEKIIEEMSQMD 639
L+S + L + ++LY+ M G P+L + L S ++ + V + E+
Sbjct: 112 LLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSG 171
Query: 638 LTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGAR 459
D +Y + IQ V N++ M +G+ P+ YN LI G + ++ A
Sbjct: 172 FRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAE 231
Query: 458 DLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGL 279
+FDEM L + T+NTLI+ +CK+ ++D A+ + M + P + N LLSGL
Sbjct: 232 KMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGL 291
Query: 278 REEGRFEEAETISSEISVKG 219
+ + +EA ++ E+ V G
Sbjct: 292 CKMRKMKEARSLLKEMEVNG 311
Score = 72.0 bits (175), Expect = 2e-10
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 1/210 (0%)
Frame = -2
Query: 815 LISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEK-DRPDLVEKIIEEMSQMD 639
L S N K +DL+ ++ +G + + I K + + ++ M +
Sbjct: 147 LFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRG 206
Query: 638 LTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGAR 459
+ P+ +YN LI I+ A ++ +M N + +TYN+LI G K+G L A
Sbjct: 207 VRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAF 266
Query: 458 DLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGL 279
+ + M K ++PN TFN+L+ CK++ + A KEM GF P + L GL
Sbjct: 267 KMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGL 326
Query: 278 REEGRFEEAETISSEISVKGVNKSSLHGDL 189
A + + + KG+ ++ G +
Sbjct: 327 LRCDDGNGAMELYEQATEKGIRINNYTGSI 356
Score = 64.7 bits (156), Expect = 2e-08
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 1/209 (0%)
Frame = -2
Query: 824 YNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEK-DRPDLVEKIIEEMS 648
YN LI G + ++ +M + ++ T+++LI + K D K+ E M
Sbjct: 214 YNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMK 273
Query: 647 QMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQ 468
+ + P+ + +N L+ +++A L +M G PD TY+ L G L+ +
Sbjct: 274 EKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGN 333
Query: 467 GARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLL 288
GA +L+++ KG+ N+ T + L+ CK ++ A K+ + G + N +
Sbjct: 334 GAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFV 393
Query: 287 SGLREEGRFEEAETISSEISVKGVNKSSL 201
+G G +A + G+ +S+
Sbjct: 394 NGYCRIGDMNKAILTIERMESFGLRPNSI 422
>ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 196 bits (499), Expect = 4e-48
Identities = 97/205 (47%), Positives = 137/205 (66%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLVEKIIEEMS 648
TYN+LISG++ + N +KCL+LY KM GIKPT+ TFH LI K+ ++K+ +EM
Sbjct: 572 TYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEML 631
Query: 647 QMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQ 468
QMDL PD+ VYNE+I + N+ KA L+ M+++G+ DK+TYNSLI L+ +
Sbjct: 632 QMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVS 691
Query: 467 GARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLL 288
+ L D+M KGL P T+N LI+ C LKD +GAY WY+EM++ G VS+C +L+
Sbjct: 692 EIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLI 751
Query: 287 SGLREEGRFEEAETISSEISVKGVN 213
SGLREEG EA+ +SSE+S+ G+N
Sbjct: 752 SGLREEGMLREAQIVSSELSIGGLN 776
Score = 104 bits (260), Expect = 2e-20
Identities = 60/188 (31%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDL-VEKIIEEM 651
TYN+LI+G+ G+ +C + +M+ AGIKP + ++ SLI+ KDR + E ++ +M
Sbjct: 432 TYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADM 491
Query: 650 SQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNL 471
++P+ +YN LI+ ++ A + +M+ GI +TYN+LI G + G +
Sbjct: 492 IGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRV 551
Query: 470 QGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKL 291
+ A DLF +M KG +P+ T+N+LI + K + Y +M G P V + L
Sbjct: 552 KKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPL 611
Query: 290 LSGLREEG 267
+ R+EG
Sbjct: 612 IYACRKEG 619
Score = 99.4 bits (246), Expect = 9e-19
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 1/206 (0%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIF-EKDRPDLVEKIIEEM 651
+YN L++ + G+++K + ++M G++P TF+++IS F E D E + M
Sbjct: 362 SYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRM 421
Query: 650 SQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNL 471
+ ++P YN LI + + + +M GI P+ ++Y SLI K L
Sbjct: 422 VEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKL 481
Query: 470 QGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKL 291
A + +MI +G+SPN +N LIE C L + A+ ++ EM+++G + N L
Sbjct: 482 IDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTL 541
Query: 290 LSGLREEGRFEEAETISSEISVKGVN 213
++GL GR ++AE + +++ KG N
Sbjct: 542 INGLGRNGRVKKAEDLFLQMAGKGCN 567
Score = 91.3 bits (225), Expect = 2e-16
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 29/233 (12%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEM 651
TYNTLI G+ G +E+ L ++M ++ L T++SL++ + R D +++ EM
Sbjct: 229 TYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEM 288
Query: 650 SQMDLTP----------------------------DRVVYNELIQCFVCHDNIQKASFLY 555
P D Y L+ I+KA +
Sbjct: 289 EGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVL 348
Query: 554 TDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVKGLSPNDGTFNTLIEWHCKL 375
++ G+ P K++YN L+ + G+++ A ++M +GL PN TFNT+I C+
Sbjct: 349 AKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCET 408
Query: 374 KDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGRFEEAETISSEISVKGV 216
++D A W + M++ G P V N L++G ++G F E+ G+
Sbjct: 409 GEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGI 461
Score = 90.9 bits (224), Expect = 3e-16
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
Frame = -2
Query: 785 LEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRP-DLVEKIIEEMSQMDLTPDRVVYNE 609
L++ DLY M G P+ + + L+ R + + ++ PD V Y +
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162
Query: 608 LIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVKG 429
+Q V ++ K L M+ G+ P YN ++ G K+ ++ AR LFDEMI +
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222
Query: 428 LSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVC-NKLLSGLREEGRFEEA 252
+ PN T+NTLI+ +CK+ I+ A + +KE +K C V N LL+GL GR ++A
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEA-LGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDA 281
Query: 251 ETISSEISVKG 219
+ E+ G
Sbjct: 282 REVLLEMEGSG 292
Score = 72.8 bits (177), Expect = 9e-11
Identities = 49/237 (20%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKP---------------------------- 732
TYN+L++G +G ++ ++ +M +G P
Sbjct: 264 TYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRI 323
Query: 731 TLNTFHSLIS-IFEKDRPDLVEKIIEEMSQMDLTPDRVVYNELIQCFVCHDNIQKASFLY 555
T+ L++ + R + E+++ ++ + +TP ++ YN L+ + +++KA
Sbjct: 324 DERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTT 383
Query: 554 TDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVKGLSPNDGTFNTLIEWHCKL 375
M +G+ P+++T+N++I+ + G + A M+ KG+SP T+N+LI + +
Sbjct: 384 EQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQK 443
Query: 374 KDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGRFEEAETISSEISVKGVNKSS 204
+ + EM K G P V L++ L ++ + +AE + +++ +GV+ ++
Sbjct: 444 GHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNA 500
Score = 56.2 bits (134), Expect = 9e-06
Identities = 49/225 (21%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Frame = -2
Query: 788 NLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEMSQMDLTPDRVVYN 612
+L+K +L K M G+ P++ ++ ++ + + R K+ +EM Q ++ P+ V YN
Sbjct: 172 DLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYN 231
Query: 611 ELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVK 432
LI + I++A M + + + +TYNSL+ G G + AR++ EM
Sbjct: 232 TLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGS 291
Query: 431 GLSP----------------NDGTFN------------TLIEWHCKLKDIDGAYMWYKEM 336
G P +DG F+ L+ C++ I+ A ++
Sbjct: 292 GFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKL 351
Query: 335 LKTGFWPCVSVCNKLLSGLREEGRFEEAETISSEISVKGVNKSSL 201
++ G P N L++ +EG ++A + ++ +G+ + +
Sbjct: 352 VENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRI 396
>ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product
[Arabidopsis thaliana] gi|28973713|gb|AAO64173.1| unknown
protein [Arabidopsis thaliana] gi|29824237|gb|AAP04079.1|
unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein
[Arabidopsis thaliana] gi|332004380|gb|AED91763.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 816
Score = 190 bits (483), Expect = 3e-46
Identities = 96/214 (44%), Positives = 143/214 (66%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLVEKIIEEMS 648
TYN+LISG+ AGN+++C+ LY++M +GIKPTL T+H LIS+ K+ +L E++ EMS
Sbjct: 601 TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMS 660
Query: 647 QMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQ 468
L PD +VYN ++ C+ H +++KA L M+ K I DK TYNSLI GQLK+G L
Sbjct: 661 ---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 717
Query: 467 GARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLL 288
R L DEM + + P T+N +++ HC++KD AY+WY+EM + GF V + N+L+
Sbjct: 718 EVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELV 777
Query: 287 SGLREEGRFEEAETISSEISVKGVNKSSLHGDLS 186
SGL+EE R +EAE + SE++ + + ++ DLS
Sbjct: 778 SGLKEEWRSKEAEIVISEMNGRMLGDVTVDEDLS 811
Score = 109 bits (272), Expect = 9e-22
Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 1/208 (0%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEM 651
TYNTLI G+ AGN EK + ++M I+P+L TF++L+ +F+ + E +++EM
Sbjct: 251 TYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM 310
Query: 650 SQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNL 471
+ PD ++ L + ++ + A +Y ++ G+ + T + L+ K G +
Sbjct: 311 KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKI 370
Query: 470 QGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKL 291
+ A ++ + KGL PN+ +NT+I+ +C+ D+ GA M + M K G P N L
Sbjct: 371 EKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL 430
Query: 290 LSGLREEGRFEEAETISSEISVKGVNKS 207
+ E G E AE +++ +KGV+ S
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPS 458
Score = 98.6 bits (244), Expect = 2e-18
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 9/225 (4%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLVEKIIE-EM 651
TYN LI G+ +KC D+ K+M G P + ++ +LI+ K L +I++ +M
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 650 SQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNL 471
++P +YN LI I+ A +ML KGI + +TYN+LI G G L
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 470 QGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKL 291
A DL E+ KGL P+ T+N+LI + ++ Y+EM ++G P + + L
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLL 640
Query: 290 LSGLREEGRFEEAETISSEISVKG--------VNKSSLHGDLSVA 180
+S +EG E E + E+S+K ++ ++HGD+ A
Sbjct: 641 ISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKA 684
Score = 85.5 bits (210), Expect = 1e-14
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 1/204 (0%)
Frame = -2
Query: 824 YNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIF-EKDRPDLVEKIIEEMS 648
YNT+I G+ G+L + M G+KP ++ LI F E + EK + +M
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 647 QMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQ 468
++P YN LI + K + +M + G P+ ++Y +LI K L
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 467 GARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLL 288
A+ + +M +G+SP +N LI+ C I+ A+ + KEMLK G + N L+
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 287 SGLREEGRFEEAETISSEISVKGV 216
GL G+ EAE + EIS KG+
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGL 595
Score = 81.3 bits (199), Expect = 2e-13
Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKD-RPDLVEKIIEEM 651
T++ L G+S+ E L +Y+ +G+K T L++ K+ + + E+I+
Sbjct: 321 TFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGRE 380
Query: 650 SQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNL 471
L P+ V+YN +I + ++ A M +G+ PD + YN LI ++G +
Sbjct: 381 MAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEM 440
Query: 470 QGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKL 291
+ A ++M +KG+SP+ T+N LI + + + D + KEM G P V L
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 290 LSGLREEGRFEEAETISSEISVKGVN 213
++ L + + EA+ + ++ +GV+
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVS 526
Score = 79.7 bits (195), Expect = 7e-13
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 1/190 (0%)
Frame = -2
Query: 785 LEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLVE-KIIEEMSQMDLTPDRVVYNE 609
+ + DL+ + GI P+ ++ L+ K + V + + + D P + +Y +
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 608 LIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQGARDLFDEMIVKG 429
IQ V ++ K L+ M + I P YN LI G K + A LFDEM+ +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 428 LSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLLSGLREEGRFEEAE 249
L P+ T+NTLI+ +CK + + ++ + M P + N LL GL + G E+AE
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 248 TISSEISVKG 219
+ E+ G
Sbjct: 305 NVLKEMKDLG 314
Score = 78.6 bits (192), Expect = 2e-12
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 2/206 (0%)
Frame = -2
Query: 827 TYNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLISIFEKDRPDLV--EKIIEE 654
T + L++ G +EK ++ + G+ P ++++I + + + DLV IE
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR-KGDLVGARMKIEA 414
Query: 653 MSQMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGN 474
M + + PD + YN LI+ F ++ A M KG+ P TYN LI G +
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 473 LQGARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNK 294
D+ EM G PN ++ TLI CK + A + ++M G P V + N
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 293 LLSGLREEGRFEEAETISSEISVKGV 216
L+ G +G+ E+A S E+ KG+
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGI 560
Score = 76.3 bits (186), Expect = 8e-12
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 1/204 (0%)
Frame = -2
Query: 824 YNTLISGFSNAGNLEKCLDLYKKMNTAGIKPTLNTFHSLIS-IFEKDRPDLVEKIIEEMS 648
Y I ++ K L+L+ +M I P++ ++ LI + + R + E++ +EM
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 647 QMDLTPDRVVYNELIQCFVCHDNIQKASFLYTDMLNKGIPPDKMTYNSLITGQLKMGNLQ 468
L P + YN LI + N +K+ + M I P +T+N+L+ G K G ++
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 467 GARDLFDEMIVKGLSPNDGTFNTLIEWHCKLKDIDGAYMWYKEMLKTGFWPCVSVCNKLL 288
A ++ EM G P+ TF+ L + + + + A Y+ + +G C+ LL
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 287 SGLREEGRFEEAETISSEISVKGV 216
+ L +EG+ E+AE I KG+
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGL 385