BLASTX nr result

ID: Scutellaria23_contig00032298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00032298
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containi...   104   7e-21
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]   104   7e-21
ref|XP_003530173.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    90   2e-16
ref|NP_973481.1| pentatricopeptide repeat-containing protein [Ar...    89   3e-16
ref|NP_565422.1| pentatricopeptide repeat-containing protein [Ar...    89   3e-16

>ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like [Vitis vinifera]
          Length = 458

 Score =  104 bits (260), Expect = 7e-21
 Identities = 47/74 (63%), Positives = 61/74 (82%)
 Frame = -2

Query: 224 LNLMSNSGFPPNQVSTDVAVRALCGCGREEHAIELVKELCAKNSPPDTYTYNFMVRHLVK 45
           LNLM   GFPP++V+TD+AVR+LC  GREEHAIELVKEL  K+SPPD++TYNF++RHL K
Sbjct: 224 LNLMVTHGFPPDRVTTDIAVRSLCSAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCK 283

Query: 44  NRSIDTVNCFIKDM 3
            R++ TV  FI ++
Sbjct: 284 TRALSTVYNFIDEL 297


>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
          Length = 472

 Score =  104 bits (260), Expect = 7e-21
 Identities = 47/74 (63%), Positives = 61/74 (82%)
 Frame = -2

Query: 224 LNLMSNSGFPPNQVSTDVAVRALCGCGREEHAIELVKELCAKNSPPDTYTYNFMVRHLVK 45
           LNLM   GFPP++V+TD+AVR+LC  GREEHAIELVKEL  K+SPPD++TYNF++RHL K
Sbjct: 156 LNLMVTHGFPPDRVTTDIAVRSLCSAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCK 215

Query: 44  NRSIDTVNCFIKDM 3
            R++ TV  FI ++
Sbjct: 216 TRALSTVYNFIDEL 229


>ref|XP_003530173.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g17670-like [Glycine max]
          Length = 456

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 40/74 (54%), Positives = 55/74 (74%)
 Frame = -2

Query: 224 LNLMSNSGFPPNQVSTDVAVRALCGCGREEHAIELVKELCAKNSPPDTYTYNFMVRHLVK 45
           LNLM  +G  P+  + DVAVR+LC  GR +HA+EL+KE  +K+ PPDTYT+NF+V+HL K
Sbjct: 138 LNLMLAAGITPDTATADVAVRSLCSAGRLDHAVELIKEFASKHCPPDTYTFNFLVKHLCK 197

Query: 44  NRSIDTVNCFIKDM 3
           + +I TV  FI +M
Sbjct: 198 SSTITTVYAFIDEM 211


>ref|NP_973481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|330251569|gb|AEC06663.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 349

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/75 (54%), Positives = 57/75 (76%)
 Frame = -2

Query: 227 VLNLMSNSGFPPNQVSTDVAVRALCGCGREEHAIELVKELCAKNSPPDTYTYNFMVRHLV 48
           VLNLM N+G  P+QV+TD+AVR+LC  GR + A +L+KEL  K+SPPDTYTYNF+++HL 
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205

Query: 47  KNRSIDTVNCFIKDM 3
           K + +  V  F+ +M
Sbjct: 206 KCKDLHVVYEFVDEM 220


>ref|NP_565422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75146596|sp|Q84J71.1|PP161_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g17670 gi|28393395|gb|AAO42121.1| unknown protein
           [Arabidopsis thaliana] gi|28973597|gb|AAO64123.1|
           unknown protein [Arabidopsis thaliana]
           gi|330251570|gb|AEC06664.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 463

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/75 (54%), Positives = 57/75 (76%)
 Frame = -2

Query: 227 VLNLMSNSGFPPNQVSTDVAVRALCGCGREEHAIELVKELCAKNSPPDTYTYNFMVRHLV 48
           VLNLM N+G  P+QV+TD+AVR+LC  GR + A +L+KEL  K+SPPDTYTYNF+++HL 
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205

Query: 47  KNRSIDTVNCFIKDM 3
           K + +  V  F+ +M
Sbjct: 206 KCKDLHVVYEFVDEM 220


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