BLASTX nr result

ID: Scutellaria23_contig00032271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00032271
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   275   6e-72
ref|XP_003520235.1| PREDICTED: mismatch repair endonuclease PMS2...   270   2e-70
emb|CBI36837.3| unnamed protein product [Vitis vinifera]              269   3e-70
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   269   3e-70
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]   268   7e-70

>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
           gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
           pms2, putative [Ricinus communis]
          Length = 924

 Score =  275 bits (703), Expect = 6e-72
 Identities = 141/222 (63%), Positives = 172/222 (77%), Gaps = 1/222 (0%)
 Frame = +1

Query: 1   VIAKGVRLVCTNTTGKNARSVVLKTQGSGCLKENIIMVFGTSTFSCLEPLSLSISECCEV 180
           +IAKGVRL+CTNTTG+NA+ VVLKTQG+  LK+NII VFG STFSCLEP+S+ IS+CC+V
Sbjct: 187 LIAKGVRLLCTNTTGRNAKIVVLKTQGTDSLKDNIITVFGMSTFSCLEPVSICISDCCKV 246

Query: 181 EGFVSKPGYGSGRNLGDRQFFFVNGRPVDMPKIGKLVNELYRGANSRQYPIAIMNFLVPT 360
           +GF+SKPG GSGRNLGDRQ++FVNGRPVDMPK+ KLVNELYRGANSRQYPIAIMNF+VPT
Sbjct: 247 DGFLSKPGQGSGRNLGDRQYYFVNGRPVDMPKVTKLVNELYRGANSRQYPIAIMNFIVPT 306

Query: 361 RSYDVNVTPDKRKVFFSDENSILQSLREALEKIYSSNQASFSVNQVCELSDGKHASNVHS 540
           R+ DVNVTPDKRK+FFSDE SIL +LRE L+ IYS + AS+SVN+  E       S   S
Sbjct: 307 RACDVNVTPDKRKIFFSDETSILHALREGLQNIYSPSNASYSVNKFEERIKAASNSQSCS 366

Query: 541 LHERSQFLSDS-SLEPKETDDKLCANGSSNLKTALDSVRDSS 663
            HE+S  LS   S    + ++ L    +S+    L +V+  S
Sbjct: 367 PHEKSLVLSKQLSAVSNDAEEILVEEHTSDGSNLLQTVKMKS 408


>ref|XP_003520235.1| PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max]
          Length = 1036

 Score =  270 bits (690), Expect = 2e-70
 Identities = 133/217 (61%), Positives = 168/217 (77%)
 Frame = +1

Query: 1   VIAKGVRLVCTNTTGKNARSVVLKTQGSGCLKENIIMVFGTSTFSCLEPLSLSISECCEV 180
           +IAKGVR VCTNTTGKN RSVVLKTQGSG LK+N+I V G +TFSCLEP++LSIS+ C+V
Sbjct: 186 LIAKGVRFVCTNTTGKNVRSVVLKTQGSGSLKDNVITVLGMNTFSCLEPVTLSISDSCKV 245

Query: 181 EGFVSKPGYGSGRNLGDRQFFFVNGRPVDMPKIGKLVNELYRGANSRQYPIAIMNFLVPT 360
           EGF+SK G G+GRNLGDRQ+FFVNGRPVDMPK+ KLVNELY+GANS+QYPIAI+NF VPT
Sbjct: 246 EGFLSKSGQGNGRNLGDRQYFFVNGRPVDMPKVSKLVNELYKGANSKQYPIAILNFTVPT 305

Query: 361 RSYDVNVTPDKRKVFFSDENSILQSLREALEKIYSSNQASFSVNQVCELSDGKHASNVHS 540
           R YDVNVTPDKRK+FFS+EN+ILQ+LRE L++IYS++   +SVN+V   ++ +    + S
Sbjct: 306 RVYDVNVTPDKRKIFFSEENAILQALREGLQQIYSASNVCYSVNEVMLPAEKEECVELCS 365

Query: 541 LHERSQFLSDSSLEPKETDDKLCANGSSNLKTALDSV 651
            H +S  +            K   + S+N   +LD +
Sbjct: 366 SHGKSPIVRKLYSPNASCPQKEQCSESNNGSVSLDEI 402


>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  269 bits (688), Expect = 3e-70
 Identities = 135/191 (70%), Positives = 160/191 (83%)
 Frame = +1

Query: 1   VIAKGVRLVCTNTTGKNARSVVLKTQGSGCLKENIIMVFGTSTFSCLEPLSLSISECCEV 180
           +IA GVRLVCTNTTGKN +S+VLKTQGSG LK+NII VFG +TF+CLEPL++ +S+  +V
Sbjct: 190 LIAGGVRLVCTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLEPLNICLSDSSKV 249

Query: 181 EGFVSKPGYGSGRNLGDRQFFFVNGRPVDMPKIGKLVNELYRGANSRQYPIAIMNFLVPT 360
           +GFVSK GYGSGR LGDRQFFFVNGRPVDMPK+GKLVNELY+GANSRQYPIAIMNF VPT
Sbjct: 250 DGFVSKSGYGSGRTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSRQYPIAIMNFTVPT 309

Query: 361 RSYDVNVTPDKRKVFFSDENSILQSLREALEKIYSSNQASFSVNQVCELSDGKHASNVHS 540
           R+YDVNVTPDKRK+FFSDE SIL SLRE LEKIYS +  S+SVN+  E ++    S ++ 
Sbjct: 310 RAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETDNSELNP 369

Query: 541 LHERSQFLSDS 573
              ++Q LS S
Sbjct: 370 --PQTQILSSS 378


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  269 bits (688), Expect = 3e-70
 Identities = 135/191 (70%), Positives = 160/191 (83%)
 Frame = +1

Query: 1   VIAKGVRLVCTNTTGKNARSVVLKTQGSGCLKENIIMVFGTSTFSCLEPLSLSISECCEV 180
           +IA GVRLVCTNTTGKN +S+VLKTQGSG LK+NII VFG +TF+CLEPL++ +S+  +V
Sbjct: 190 LIAGGVRLVCTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLEPLNICLSDSSKV 249

Query: 181 EGFVSKPGYGSGRNLGDRQFFFVNGRPVDMPKIGKLVNELYRGANSRQYPIAIMNFLVPT 360
           +GFVSK GYGSGR LGDRQFFFVNGRPVDMPK+GKLVNELY+GANSRQYPIAIMNF VPT
Sbjct: 250 DGFVSKSGYGSGRTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSRQYPIAIMNFTVPT 309

Query: 361 RSYDVNVTPDKRKVFFSDENSILQSLREALEKIYSSNQASFSVNQVCELSDGKHASNVHS 540
           R+YDVNVTPDKRK+FFSDE SIL SLRE LEKIYS +  S+SVN+  E ++    S ++ 
Sbjct: 310 RAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETDNSELNP 369

Query: 541 LHERSQFLSDS 573
              ++Q LS S
Sbjct: 370 --PQTQILSSS 378


>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score =  268 bits (685), Expect = 7e-70
 Identities = 131/179 (73%), Positives = 154/179 (86%)
 Frame = +1

Query: 1    VIAKGVRLVCTNTTGKNARSVVLKTQGSGCLKENIIMVFGTSTFSCLEPLSLSISECCEV 180
            +IA GVRLVCTNTTGKN +S+VLKTQGSG LK+NII VFG +TF+CLEPL++ +S+  +V
Sbjct: 2889 LIAGGVRLVCTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLEPLNICLSDSSKV 2948

Query: 181  EGFVSKPGYGSGRNLGDRQFFFVNGRPVDMPKIGKLVNELYRGANSRQYPIAIMNFLVPT 360
            +GFVSK GYGSGR LGDRQFFFVNGRPVDMPK+GKLVNELY+GANSRQYPIAIMNF VPT
Sbjct: 2949 DGFVSKSGYGSGRTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSRQYPIAIMNFTVPT 3008

Query: 361  RSYDVNVTPDKRKVFFSDENSILQSLREALEKIYSSNQASFSVNQVCELSDGKHASNVH 537
            R+YDVNVTPDKRK+FFSDE SIL SLRE LEKIYS +  S+SVN+  E ++    S ++
Sbjct: 3009 RAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETBNSELN 3067


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