BLASTX nr result

ID: Scutellaria23_contig00032251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00032251
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, put...   130   1e-28
ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucum...   122   4e-26
ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vini...   117   1e-24
ref|XP_002332533.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glyci...   113   1e-23

>ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223538070|gb|EEF39682.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 427

 Score =  130 bits (327), Expect = 1e-28
 Identities = 72/129 (55%), Positives = 87/129 (67%), Gaps = 6/129 (4%)
 Frame = +1

Query: 1   KISLTRVRAVPRYSFSLETLQDLNKLRPTIGVMPSGLPWTE-----DGKIVGSSESSLKK 165
           K S TRVRAVPRYSFS+ TL++LNK+ PTIG+MPSGLPW       D  + GS  +S  K
Sbjct: 226 KTSQTRVRAVPRYSFSINTLEELNKMHPTIGIMPSGLPWVVKPTKGDDNLFGSFLTSRYK 285

Query: 166 TELGK-KTDSCSKMDDLAGNPASPMKLHDCIYVVPYSDHSCFSEIQEFVELVRPVKLKGI 342
              GK   +  +  D L G+  S  +LH  IY VPYSDHSCFSEIQEF+ELV+P  +KGI
Sbjct: 286 N--GKLSANGGTGTDKLNGSVQSVERLHQYIYSVPYSDHSCFSEIQEFIELVQPTSMKGI 343

Query: 343 VSSPRCCID 369
           VSS  C I+
Sbjct: 344 VSSSSCYIN 352


>ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
           gi|449493187|ref|XP_004159216.1| PREDICTED: 5'
           exonuclease Apollo-like [Cucumis sativus]
          Length = 428

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/127 (49%), Positives = 85/127 (66%), Gaps = 4/127 (3%)
 Frame = +1

Query: 1   KISLTRVRAVPRYSFSLETLQDLNKLRPTIGVMPSGLPWT---EDGKIVGSSESSLKKTE 171
           K +LTRVRAVPRYSFS++TL+ LN++RPTIG+MPSGLPW     +G  + S    + +  
Sbjct: 226 KTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVVRPHEGDGIPSGSLLITRYR 285

Query: 172 LGKKTDSCS-KMDDLAGNPASPMKLHDCIYVVPYSDHSCFSEIQEFVELVRPVKLKGIVS 348
             K  ++    ++   G   S  KLH  I+ VPYSDH+CFSEIQEF++L+ P  +KGIVS
Sbjct: 286 QSKLNENGPFLIEKQTGKVESVTKLHKYIFSVPYSDHACFSEIQEFIKLICPTTIKGIVS 345

Query: 349 SPRCCID 369
           S  C I+
Sbjct: 346 SSSCYIE 352


>ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
           gi|296081253|emb|CBI17997.3| unnamed protein product
           [Vitis vinifera]
          Length = 435

 Score =  117 bits (293), Expect = 1e-24
 Identities = 62/133 (46%), Positives = 82/133 (61%), Gaps = 10/133 (7%)
 Frame = +1

Query: 1   KISLTRVRAVPRYSFSLETLQDLNKLRPTIGVMPSGLPWTEDGKIVGSSESSLKKTELGK 180
           K SLTR+RAVPRYSFS+ TL+ LN +RPTIG+MPSGLPW     +V  SE +        
Sbjct: 226 KTSLTRIRAVPRYSFSINTLEGLNTVRPTIGIMPSGLPW-----VVKPSEGNDNPAGPPS 280

Query: 181 KTDSCSKMDDLAGNP----------ASPMKLHDCIYVVPYSDHSCFSEIQEFVELVRPVK 330
            +  C     + G P           S ++ H  IY VPYS+HSCF EI++F++LV+P+ 
Sbjct: 281 ISHHCGNKRIINGGPRAEINKKGKLRSVVRFHQYIYSVPYSEHSCFPEIEDFIKLVQPIN 340

Query: 331 LKGIVSSPRCCID 369
           +KGIVSS  C I+
Sbjct: 341 IKGIVSSSFCYIE 353


>ref|XP_002332533.1| predicted protein [Populus trichocarpa] gi|222832669|gb|EEE71146.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  117 bits (292), Expect = 1e-24
 Identities = 67/128 (52%), Positives = 82/128 (64%), Gaps = 5/128 (3%)
 Frame = +1

Query: 1   KISLTRVRAVPRYSFSLETLQDLNKLRPTIGVMPSGLPWT-----EDGKIVGSSESSLKK 165
           K SLTRVRAVP YS S+ETL+ LN +RPTIG+MPSGLPW       D  + GS  +S  K
Sbjct: 219 KNSLTRVRAVPCYSLSVETLEGLNTMRPTIGIMPSGLPWVLKPVKGDDNLFGSLLTSRYK 278

Query: 166 TELGKKTDSCSKMDDLAGNPASPMKLHDCIYVVPYSDHSCFSEIQEFVELVRPVKLKGIV 345
               K+  S    D L GN A   + H  ++ VPYS H CF+EIQEF+ELV+P  +KGIV
Sbjct: 279 ----KRQPS----DKLDGNLAYAERYHQYMFSVPYSYHLCFAEIQEFIELVQPANMKGIV 330

Query: 346 SSPRCCID 369
           SS  C +D
Sbjct: 331 SSSSCYVD 338


>ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max]
          Length = 437

 Score =  113 bits (283), Expect = 1e-23
 Identities = 61/127 (48%), Positives = 82/127 (64%), Gaps = 6/127 (4%)
 Frame = +1

Query: 7   SLTRVRAVPRYSFSLETLQDLNKLRPTIGVMPSGLPWTEDGKIVGSSE------SSLKKT 168
           SLTRVRAVP YSFS+ T+++LN + PTIG+MPSGLPW +        +      S  K+ 
Sbjct: 223 SLTRVRAVPVYSFSINTVEELNYVCPTIGIMPSGLPWIKKSHQKNELQTGSFLTSRYKRG 282

Query: 169 ELGKKTDSCSKMDDLAGNPASPMKLHDCIYVVPYSDHSCFSEIQEFVELVRPVKLKGIVS 348
           +L   T++  ++D       SP K+H  IY VPYSDHS + EI++FV+LV+P  LKGIVS
Sbjct: 283 KLSANTET--QIDKQIVKTGSPEKIHKYIYTVPYSDHSNYEEIEDFVKLVKPTTLKGIVS 340

Query: 349 SPRCCID 369
           S  C I+
Sbjct: 341 SSSCYIE 347


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