BLASTX nr result

ID: Scutellaria23_contig00032211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00032211
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533891.1| pentatricopeptide repeat-containing protein,...    64   1e-08
ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07
ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06
gb|ACU25679.1| pentatricopeptide repeat-containing protein [Priv...    57   2e-06

>ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526155|gb|EEF28491.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 701

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = -3

Query: 388 TFKGLCSCNRISSAISFLHNALTNKVVPTIVTWNILIRAIIHSRT 254
           T KGLCSC+RIS AI FL++AL   ++PT VTWNIL+RA ++ RT
Sbjct: 647 TIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAAVNFRT 691


>ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/46 (54%), Positives = 36/46 (78%)
 Frame = -3

Query: 388 TFKGLCSCNRISSAISFLHNALTNKVVPTIVTWNILIRAIIHSRTL 251
           T KGLCSC+RIS A+ FL++A+   V+PT +TWNIL+RA++ +  L
Sbjct: 645 TLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690


>ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
           gi|449516585|ref|XP_004165327.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = -3

Query: 388 TFKGLCSCNRISSAISFLHNALTNKVVPTIVTWNILIRAIIHSRTL 251
           TFKGLCSC R+S AI FL++AL   ++P   TWN+L+RA++  + L
Sbjct: 645 TFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPL 690


>ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = -3

Query: 388 TFKGLCSCNRISSAISFLHNALTNKVVPTIVTWNILIRAII 266
           T KGLCSC R++ A+ FL +AL    +PT +TWNIL+RA+I
Sbjct: 641 TLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRAVI 681


>gb|ACU25679.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 376

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = -3

Query: 388 TFKGLCSCNRISSAISFLHNALTNKVVPTIVT 293
           T KGLCSCNRIS AI FLH+ALT K+VPTI+T
Sbjct: 345 TLKGLCSCNRISGAILFLHDALTKKIVPTIIT 376


Top