BLASTX nr result

ID: Scutellaria23_contig00032076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00032076
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864790.1| hypothetical protein ARALYDRAFT_496418 [Arab...   118   6e-25
gb|AAK58634.1|AF271731_1 SMC2-like condensin [Arabidopsis thalia...   117   1e-24
ref|NP_201047.1| structural maintenance of chromosomes protein 2...   117   1e-24
gb|AAG53093.1|AF306547_1 SMC2-1 [Arabidopsis thaliana]                117   1e-24
ref|XP_004165033.1| PREDICTED: structural maintenance of chromos...   116   2e-24

>ref|XP_002864790.1| hypothetical protein ARALYDRAFT_496418 [Arabidopsis lyrata subsp.
            lyrata] gi|297310625|gb|EFH41049.1| hypothetical protein
            ARALYDRAFT_496418 [Arabidopsis lyrata subsp. lyrata]
          Length = 1175

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/60 (96%), Positives = 59/60 (98%)
 Frame = -3

Query: 284  AALDLSHTQNIGRMIKTHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQS 105
            AALDLSHTQNIGRMIK HFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQ+
Sbjct: 1115 AALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQT 1174


>gb|AAK58634.1|AF271731_1 SMC2-like condensin [Arabidopsis thaliana] gi|13449986|gb|AAG27593.2|
            SMC2-like condensin [Arabidopsis thaliana]
          Length = 1177

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/60 (95%), Positives = 59/60 (98%)
 Frame = -3

Query: 284  AALDLSHTQNIGRMIKTHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQS 105
            AALDLSHTQNIGRMI+ HFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQ+
Sbjct: 1117 AALDLSHTQNIGRMIRAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQT 1176


>ref|NP_201047.1| structural maintenance of chromosomes protein 2-1 [Arabidopsis
            thaliana] gi|146325733|sp|Q9C5Y4.2|SMC21_ARATH RecName:
            Full=Structural maintenance of chromosomes protein 2-1;
            Short=AtSMC2-1; AltName: Full=Chromosome-associated
            protein E-1; Short=AtCAP-E1; AltName: Full=Protein TITAN
            3 gi|10178072|dbj|BAB11491.1| chromosome assembly protein
            homolog [Arabidopsis thaliana]
            gi|332010222|gb|AED97605.1| structural maintenance of
            chromosomes protein 2-1 [Arabidopsis thaliana]
          Length = 1175

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/60 (95%), Positives = 59/60 (98%)
 Frame = -3

Query: 284  AALDLSHTQNIGRMIKTHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQS 105
            AALDLSHTQNIGRMI+ HFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQ+
Sbjct: 1115 AALDLSHTQNIGRMIRAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQT 1174


>gb|AAG53093.1|AF306547_1 SMC2-1 [Arabidopsis thaliana]
          Length = 1175

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/60 (95%), Positives = 59/60 (98%)
 Frame = -3

Query: 284  AALDLSHTQNIGRMIKTHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQS 105
            AALDLSHTQNIGRMI+ HFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQ+
Sbjct: 1115 AALDLSHTQNIGRMIRAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQT 1174


>ref|XP_004165033.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like
            [Cucumis sativus]
          Length = 1176

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/61 (93%), Positives = 58/61 (95%)
 Frame = -3

Query: 284  AALDLSHTQNIGRMIKTHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQS 105
            AALDLSHTQNIGRMIK HFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVT + 
Sbjct: 1115 AALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTAKQ 1174

Query: 104  N 102
            N
Sbjct: 1175 N 1175


Top