BLASTX nr result

ID: Scutellaria23_contig00032012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00032012
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp....   166   2e-39
ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis th...   166   2e-39
ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin...   164   9e-39
ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm...   163   1e-38
ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38

>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297315090|gb|EFH45513.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 2147

 Score =  166 bits (420), Expect = 2e-39
 Identities = 83/120 (69%), Positives = 97/120 (80%)
 Frame = +3

Query: 6    CHNKGYVETLMGRKRFLSKIKYGNSKERSKAQRQAVNSICQGSAADIIKIAMICLHNVIG 185
            C  KGY++TL GR+RFLSKIK+GN+KE+SKAQRQAVNS+CQGSAADIIKIAMI +++ I 
Sbjct: 2006 CQEKGYIQTLKGRRRFLSKIKFGNAKEKSKAQRQAVNSMCQGSAADIIKIAMINIYSAIA 2065

Query: 186  EDTEASCPSFIDAEKFQMLKGRCRILLQVHDELVLEADPLVVKEAGLLLQTCMETAVSLL 365
            ED + +  S     +F MLKGRCRILLQVHDELVLE DP  VK A +LLQT ME AVSLL
Sbjct: 2066 EDVDTTASSSSSETRFHMLKGRCRILLQVHDELVLEVDPSYVKVAAMLLQTSMENAVSLL 2125


>ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana]
            gi|62241195|dbj|BAD93700.1| helicase and polymerase
            containing protein TEBICHI [Arabidopsis thaliana]
            gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit
            [Arabidopsis thaliana]
          Length = 2154

 Score =  166 bits (419), Expect = 2e-39
 Identities = 83/120 (69%), Positives = 97/120 (80%)
 Frame = +3

Query: 6    CHNKGYVETLMGRKRFLSKIKYGNSKERSKAQRQAVNSICQGSAADIIKIAMICLHNVIG 185
            C  KGY++TL GR+RFLSKIK+GN+KE+SKAQRQAVNS+CQGSAADIIKIAMI +++ I 
Sbjct: 2013 CQEKGYIQTLKGRRRFLSKIKFGNAKEKSKAQRQAVNSMCQGSAADIIKIAMINIYSAIA 2072

Query: 186  EDTEASCPSFIDAEKFQMLKGRCRILLQVHDELVLEADPLVVKEAGLLLQTCMETAVSLL 365
            ED + +  S     +F MLKGRCRILLQVHDELVLE DP  VK A +LLQT ME AVSLL
Sbjct: 2073 EDVDTAASSSSSETRFHMLKGRCRILLQVHDELVLEVDPSYVKLAAMLLQTSMENAVSLL 2132


>ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
          Length = 2147

 Score =  164 bits (414), Expect = 9e-39
 Identities = 87/121 (71%), Positives = 98/121 (80%)
 Frame = +3

Query: 3    SCHNKGYVETLMGRKRFLSKIKYGNSKERSKAQRQAVNSICQGSAADIIKIAMICLHNVI 182
            SC +KGYVETL GRKRFLSKIKYG+S E+SKAQRQAVNSICQGSAADIIKIAM+ +++ I
Sbjct: 1994 SCRSKGYVETLKGRKRFLSKIKYGSSTEKSKAQRQAVNSICQGSAADIIKIAMLRIYSAI 2053

Query: 183  GEDTEASCPSFIDAEKFQMLKGRCRILLQVHDELVLEADPLVVKEAGLLLQTCMETAVSL 362
                ++   S   A KF MLK RCRILLQVHDEL+LE DP V+KEA LLLQT ME AVSL
Sbjct: 2054 VTGFDSPDSSSSLATKFHMLKDRCRILLQVHDELMLEVDPSVIKEAALLLQTSMENAVSL 2113

Query: 363  L 365
            L
Sbjct: 2114 L 2114


>ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
            gi|223544402|gb|EEF45923.1| DNA polymerase theta,
            putative [Ricinus communis]
          Length = 2154

 Score =  163 bits (413), Expect = 1e-38
 Identities = 88/121 (72%), Positives = 96/121 (79%)
 Frame = +3

Query: 3    SCHNKGYVETLMGRKRFLSKIKYGNSKERSKAQRQAVNSICQGSAADIIKIAMICLHNVI 182
            SC   GYVETL GRKRFLSKIK+GNSKE+SKAQRQAVNSICQGSAAD+IKIAMI +++VI
Sbjct: 1993 SCRKNGYVETLKGRKRFLSKIKFGNSKEKSKAQRQAVNSICQGSAADLIKIAMINIYSVI 2052

Query: 183  GEDTEASCPSFIDAEKFQMLKGRCRILLQVHDELVLEADPLVVKEAGLLLQTCMETAVSL 362
                +   PS   A KF MLKGRCRILLQVHDELVLE DP V+KEA  LLQ  ME A SL
Sbjct: 2053 AR-VDGPDPSSSLATKFHMLKGRCRILLQVHDELVLEVDPPVIKEAASLLQAGMENAASL 2111

Query: 363  L 365
            L
Sbjct: 2112 L 2112


>ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|222866256|gb|EEF03387.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score =  162 bits (411), Expect = 2e-38
 Identities = 83/121 (68%), Positives = 97/121 (80%)
 Frame = +3

Query: 3   SCHNKGYVETLMGRKRFLSKIKYGNSKERSKAQRQAVNSICQGSAADIIKIAMICLHNVI 182
           SC  KGYVET+ GRKRFLSKIK+GNS+E+SKAQRQAVNSICQGSAAD+IKIAMI +H++I
Sbjct: 493 SCREKGYVETIKGRKRFLSKIKFGNSEEKSKAQRQAVNSICQGSAADLIKIAMINIHSLI 552

Query: 183 GEDTEASCPSFIDAEKFQMLKGRCRILLQVHDELVLEADPLVVKEAGLLLQTCMETAVSL 362
            +       S + A KF MLKG+CRILLQVHDELVLE DP ++ EA +LLQ  ME A SL
Sbjct: 553 VDGVGRPESSSLHANKFHMLKGQCRILLQVHDELVLEVDPSLINEAAVLLQMSMEDAASL 612

Query: 363 L 365
           L
Sbjct: 613 L 613


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