BLASTX nr result

ID: Scutellaria23_contig00031924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00031924
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39147.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002524066.1| ATP-dependent RNA helicase, putative [Ricinu...    56   3e-06
ref|XP_002264021.2| PREDICTED: probable ATP-dependent RNA helica...    55   6e-06

>emb|CBI39147.3| unnamed protein product [Vitis vinifera]
          Length = 1356

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +1

Query: 187 KESHAYNKGKALVVSKVPLPNYRADLDEQ 273
           ++SHAYNKGK LVVSKVPLPNYRADLDE+
Sbjct: 172 QKSHAYNKGKTLVVSKVPLPNYRADLDER 200


>ref|XP_002524066.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223536634|gb|EEF38276.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 994

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/34 (82%), Positives = 29/34 (85%)
 Frame = +1

Query: 172 GLYLWKESHAYNKGKALVVSKVPLPNYRADLDEQ 273
           GLY     HAYNKGKALVVSKVPLPNYRADLDE+
Sbjct: 101 GLYF----HAYNKGKALVVSKVPLPNYRADLDER 130


>ref|XP_002264021.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
           vinifera]
          Length = 991

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/41 (68%), Positives = 32/41 (78%)
 Frame = +1

Query: 151 LADNMIYGLYLWKESHAYNKGKALVVSKVPLPNYRADLDEQ 273
           +  +M Y L L+   HAYNKGK LVVSKVPLPNYRADLDE+
Sbjct: 92  ILSDMAYQLGLY--FHAYNKGKTLVVSKVPLPNYRADLDER 130


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