BLASTX nr result

ID: Scutellaria23_contig00031846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00031846
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09
ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06

>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
           gi|297745328|emb|CBI40408.3| unnamed protein product
           [Vitis vinifera]
          Length = 765

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = +3

Query: 3   MTEQSCNPGFATMEILTQWLPAVGETEKLRKFVQGYDVSAS 125
           MTE +CNP + TMEILT+WL AVGET KL+ FVQGY+VSAS
Sbjct: 723 MTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYEVSAS 763


>ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|222861600|gb|EEE99142.1|
           predicted protein [Populus trichocarpa]
          Length = 775

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = +3

Query: 3   MTEQSCNPGFATMEILTQWLPAVGETEKLRKFVQGYDVSASTT*K 137
           M E +CNP + TMEILT+WL AVGE E+L+KFV G +VS+ST  K
Sbjct: 726 MIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGCEVSSSTAQK 770


>ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
           gi|449475521|ref|XP_004154479.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 5/47 (10%)
 Frame = +3

Query: 3   MTEQSCNPGFATMEILTQWLPAVGETEKLRKFVQG-----YDVSAST 128
           M EQ+CNP + TMEILT+WL AVGE  KL+KF QG      DVS+S+
Sbjct: 572 MVEQACNPDYITMEILTEWLSAVGEITKLKKFTQGCMNRTEDVSSSS 618


>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/40 (57%), Positives = 31/40 (77%)
 Frame = +3

Query: 3   MTEQSCNPGFATMEILTQWLPAVGETEKLRKFVQGYDVSA 122
           M E++C P + TME+LT+WL AVGE EKL+ FV+GY  S+
Sbjct: 700 MVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQDSS 739


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