BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00031725
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...   293   3e-77
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   288   1e-75
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   268   8e-70
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              268   8e-70
ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D sub...   251   2e-64

>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score =  293 bits (750), Expect = 3e-77
 Identities = 154/269 (57%), Positives = 189/269 (70%), Gaps = 1/269 (0%)
 Frame = +2

Query: 2    QKLFXXXXXXXXXXXXXXXXXXIPRHLSCASWNNHKD-LSGDHLHGSPSISDSYIPCAVI 178
            QKLF                  +P +LSCASWNN K+ LS   L G+  I DSYIPC V+
Sbjct: 415  QKLFQHSMCLGLQHSLTPVSFSMPHYLSCASWNNQKNHLSLYRLDGTREILDSYIPCTVV 474

Query: 179  PSSFSAGLNPLECFVLSLTSRDSSFSGHADVSGTLTRRLMFFMRDLMVAYDGTVRSPYGN 358
             SS+  GLNPLE F+ SLT+RDSSFSG ADVSGTLTR+LMFFMRD++  YDGTVR+ YG+
Sbjct: 475  SSSYLMGLNPLESFLHSLTTRDSSFSGQADVSGTLTRKLMFFMRDIITGYDGTVRNSYGS 534

Query: 359  QVVQFNYCTKDMATTHSGVDVGGLAVGTIXXXXXXXXXXXXXDQPVSALEPSPLLALKKV 538
            Q+VQF+Y T DM+  +S V +GG  VG++             DQPVSALEPSPL+ALKKV
Sbjct: 535  QIVQFDYGTGDMSAVNSDVLMGGHPVGSLAACAISEAAYSALDQPVSALEPSPLIALKKV 594

Query: 539  LESGVKRSTGSKSASLFLSQRLRRWAHGFEYGALEVKDHLESLLFSDIVSEVRICFSKGT 718
            L+ GVK +TG KSASLFLS+RL +W +GFE+GALEVKDH+ESLLFS++VSEV I FS   
Sbjct: 595  LDCGVKNNTGGKSASLFLSRRLGKWVNGFEFGALEVKDHMESLLFSEVVSEVTISFSTER 654

Query: 719  DSSTSTWACHFHIKKEVSKRRRLNLRSVI 805
             ++ S W C+F I KEV  +R L L SV+
Sbjct: 655  RTNISPWVCNFCINKEVFMKRNLKLESVV 683


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  288 bits (736), Expect = 1e-75
 Identities = 157/261 (60%), Positives = 179/261 (68%), Gaps = 13/261 (4%)
 Frame = +2

Query: 68   IPRHLSCASWNNHKD-LSGDHLHGSPSISDSYIPCAVIPSSFSAGLNPLECFVLSLTSRD 244
            +PR LSC +WNNHK  L  +  H  P    SYIP AV+ SSF AGLNPLECFV SLT+RD
Sbjct: 438  MPRQLSCDAWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPLECFVHSLTTRD 497

Query: 245  SSFSGHADVSGTLTRRLMFFMRDLMVAYDGTVRSPYGNQVVQFNY----------CTKDM 394
            SSFSGHADVSGTL R+LMFFMRDL V YDGTVR+ YGNQ+VQF+Y           T + 
Sbjct: 498  SSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTKVTGEA 557

Query: 395  ATTHSGVDVGGLAVGTIXXXXXXXXXXXXXDQPVSALEPSPLLALKKVLESGVKRSTGSK 574
              +H+   +GG  VG++             DQPVSALE SPLL LKK+LESG    TG K
Sbjct: 558  LESHNHA-IGGHPVGSLAACAISEAAYCALDQPVSALESSPLLNLKKILESGAGSRTGEK 616

Query: 575  SASLFLSQRLRRWAHGFEYGALEVKDHLESLLFSDIVSEVRICFSKGTDSSTST--WACH 748
            +AS+FLS+RL RWAHGFEYGALEVK HLE LL S++VS V ICFS  T  ST    W CH
Sbjct: 617  TASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVCH 676

Query: 749  FHIKKEVSKRRRLNLRSVIDA 811
            FHI KE  K RRL LRSV+DA
Sbjct: 677  FHIDKENVKTRRLKLRSVLDA 697


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  268 bits (686), Expect = 8e-70
 Identities = 142/257 (55%), Positives = 179/257 (69%), Gaps = 9/257 (3%)
 Frame = +2

Query: 68   IPRHLSCASWNNHKDLSGDHLHGSPSISDSYIPCAVIPSSFSAGLNPLECFVLSLTSRDS 247
            IP  LSCA+WN  K + G   + +   ++SYIP AV+ +SF  GLNPLECFV S+TSRDS
Sbjct: 793  IPHQLSCAAWNKQK-VPGLIQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHSVTSRDS 851

Query: 248  SFSGHADVSGTLTRRLMFFMRDLMVAYDGTVRSPYGNQVVQFNYCTKDMATTHSGV---- 415
            SFS +AD+ GTLTRRLMFFMRDL +AYDGTVR+ YGNQ+VQF+Y  +  +T   G+    
Sbjct: 852  SFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSDGINEDT 911

Query: 416  ---DVGGLAVGTIXXXXXXXXXXXXXDQPVSALEPSPLLALKKVLESGVKRSTGSKSASL 586
               D+GG  VG+I             DQP+S LEPSPLL LK+VLE G+++ST  ++ SL
Sbjct: 912  CAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRKSTADRTVSL 971

Query: 587  FLSQRLRRWAHGFEYGALEVKDHLESLLFSDIVSEVRICFSKGTDSST--STWACHFHIK 760
            FLS++L +  HGFEYGALEVK+HLE LLFSDIVS V I FS    S T  S W CHFH+ 
Sbjct: 972  FLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTHFSPWVCHFHVC 1031

Query: 761  KEVSKRRRLNLRSVIDA 811
            +E++K+R L   S+IDA
Sbjct: 1032 EEIAKKRSLKPHSIIDA 1048


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  268 bits (686), Expect = 8e-70
 Identities = 142/257 (55%), Positives = 179/257 (69%), Gaps = 9/257 (3%)
 Frame = +2

Query: 68   IPRHLSCASWNNHKDLSGDHLHGSPSISDSYIPCAVIPSSFSAGLNPLECFVLSLTSRDS 247
            IP  LSCA+WN  K + G   + +   ++SYIP AV+ +SF  GLNPLECFV S+TSRDS
Sbjct: 662  IPHQLSCAAWNKQK-VPGLIQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHSVTSRDS 720

Query: 248  SFSGHADVSGTLTRRLMFFMRDLMVAYDGTVRSPYGNQVVQFNYCTKDMATTHSGV---- 415
            SFS +AD+ GTLTRRLMFFMRDL +AYDGTVR+ YGNQ+VQF+Y  +  +T   G+    
Sbjct: 721  SFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSDGINEDT 780

Query: 416  ---DVGGLAVGTIXXXXXXXXXXXXXDQPVSALEPSPLLALKKVLESGVKRSTGSKSASL 586
               D+GG  VG+I             DQP+S LEPSPLL LK+VLE G+++ST  ++ SL
Sbjct: 781  CAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRKSTADRTVSL 840

Query: 587  FLSQRLRRWAHGFEYGALEVKDHLESLLFSDIVSEVRICFSKGTDSST--STWACHFHIK 760
            FLS++L +  HGFEYGALEVK+HLE LLFSDIVS V I FS    S T  S W CHFH+ 
Sbjct: 841  FLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTHFSPWVCHFHVC 900

Query: 761  KEVSKRRRLNLRSVIDA 811
            +E++K+R L   S+IDA
Sbjct: 901  EEIAKKRSLKPHSIIDA 917


>ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Glycine max]
          Length = 1461

 Score =  251 bits (640), Expect = 2e-64
 Identities = 136/255 (53%), Positives = 171/255 (67%), Gaps = 7/255 (2%)
 Frame = +2

Query: 68   IPRHLSCASWNNHKDLSGDHLH-GSPSISDSYIPCAVIPSSFSAGLNPLECFVLSLTSRD 244
            +PRHLSCA+WN+ K L    +  G+     SYIP AV+ SSF  GLNPLECFV S+T+RD
Sbjct: 765  LPRHLSCAAWNSQKWLDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSVTNRD 824

Query: 245  SSFSGHADVSGTLTRRLMFFMRDLMVAYDGTVRSPYGNQVVQFNYCTKDMATTHSGVD-- 418
            SSFS HAD+ GTLTRRLMFFMRDL  AYDGTVR+ YGNQ++QF+Y  ++ ++   G    
Sbjct: 825  SSFSDHADLPGTLTRRLMFFMRDLHDAYDGTVRNLYGNQLIQFSYDIEEDSSCDKGFQEY 884

Query: 419  -VGGLAVGTIXXXXXXXXXXXXXDQPVSALEPSPLLALKKVLESGVKRSTGSKSASLFLS 595
             +GG  VG I              QPVS LE SPLL LK VLE G ++  G ++ SLFLS
Sbjct: 885  AIGGEPVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFLS 944

Query: 596  QRLRRWAHGFEYGALEVKDHLESLLFSDIVSEVRICFSKGTDSST---STWACHFHIKKE 766
            ++L +  HGFEY ALEVK++LE LLFS+IVS V I F+    SS    S W CHFH+ KE
Sbjct: 945  EKLGKQRHGFEYAALEVKNYLERLLFSNIVSTVMIIFTPHDGSSQEKYSPWVCHFHLDKE 1004

Query: 767  VSKRRRLNLRSVIDA 811
            +  RR+L + S+ID+
Sbjct: 1005 IVTRRKLKVHSIIDS 1019