BLASTX nr result

ID: Scutellaria23_contig00031598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00031598
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni...    65   1e-15
emb|CBI16259.3| unnamed protein product [Vitis vinifera]               65   1e-15
ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-13
gb|ABK93461.1| unknown [Populus trichocarpa]                           60   1e-12
ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, p...    57   2e-11

>ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis
           vinifera]
          Length = 242

 Score = 64.7 bits (156), Expect(2) = 1e-15
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = +3

Query: 84  LLLAAYPEQTDFFNGACFGSPIITAKRDMQWFQLSFEEAFYLC 212
           +LL A  EQT+  N +CFG P+ITA++D QWFQLS EEAFYLC
Sbjct: 44  VLLEAGAEQTELLNRSCFGRPVITAEKDKQWFQLSMEEAFYLC 86



 Score = 43.1 bits (100), Expect(2) = 1e-15
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = +1

Query: 1   AIAEPMSAVVSRFRLSLIESNSQGLLSGCSL 93
           A+AEPMS +VS+ + SL  S+SQGLLSGCS+
Sbjct: 14  ALAEPMSEIVSQLQSSLTRSDSQGLLSGCSV 44


>emb|CBI16259.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score = 64.7 bits (156), Expect(2) = 1e-15
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = +3

Query: 84  LLLAAYPEQTDFFNGACFGSPIITAKRDMQWFQLSFEEAFYLC 212
           +LL A  EQT+  N +CFG P+ITA++D QWFQLS EEAFYLC
Sbjct: 44  VLLEAGAEQTELLNRSCFGRPVITAEKDKQWFQLSMEEAFYLC 86



 Score = 43.1 bits (100), Expect(2) = 1e-15
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = +1

Query: 1   AIAEPMSAVVSRFRLSLIESNSQGLLSGCSL 93
           A+AEPMS +VS+ + SL  S+SQGLLSGCS+
Sbjct: 14  ALAEPMSEIVSQLQSSLTRSDSQGLLSGCSV 44


>ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|222850135|gb|EEE87682.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 62.0 bits (149), Expect(2) = 5e-13
 Identities = 27/43 (62%), Positives = 32/43 (74%)
 Frame = +3

Query: 84  LLLAAYPEQTDFFNGACFGSPIITAKRDMQWFQLSFEEAFYLC 212
           +LLA   EQT+    ACFG PIITA+++ QWFQL  EEAFYLC
Sbjct: 44  VLLAVETEQTELLTRACFGKPIITAEKEKQWFQLGLEEAFYLC 86



 Score = 37.0 bits (84), Expect(2) = 5e-13
 Identities = 16/31 (51%), Positives = 25/31 (80%)
 Frame = +1

Query: 1   AIAEPMSAVVSRFRLSLIESNSQGLLSGCSL 93
           A+A+PMS +VS+ + SL++SN+   LSGCS+
Sbjct: 14  ALADPMSEIVSQLQSSLLQSNACASLSGCSV 44


>gb|ABK93461.1| unknown [Populus trichocarpa]
          Length = 235

 Score = 60.5 bits (145), Expect(2) = 1e-12
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = +3

Query: 84  LLLAAYPEQTDFFNGACFGSPIITAKRDMQWFQLSFEEAFYLC 212
           +LLA   E+T+    ACFG PIITA+++ QWFQL  EEAFYLC
Sbjct: 44  VLLAVETEKTELLTRACFGKPIITAEKEKQWFQLGLEEAFYLC 86



 Score = 37.0 bits (84), Expect(2) = 1e-12
 Identities = 16/31 (51%), Positives = 25/31 (80%)
 Frame = +1

Query: 1   AIAEPMSAVVSRFRLSLIESNSQGLLSGCSL 93
           A+A+PMS +VS+ + SL++SN+   LSGCS+
Sbjct: 14  ALADPMSEIVSQLQSSLLQSNACASLSGCSV 44


>ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus
           communis] gi|223534295|gb|EEF36007.1| tRNA-splicing
           endonuclease subunit Sen2-2, putative [Ricinus communis]
          Length = 237

 Score = 57.4 bits (137), Expect(2) = 2e-11
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = +3

Query: 84  LLLAAYPEQTDFFNGACFGSPIITAKRDMQWFQLSFEEAFYL 209
           +LLA   EQT+    ACFG P+IT+++D QWFQL  EEAFYL
Sbjct: 44  VLLAVESEQTELLTRACFGRPMITSEKDKQWFQLGIEEAFYL 85



 Score = 36.2 bits (82), Expect(2) = 2e-11
 Identities = 16/31 (51%), Positives = 24/31 (77%)
 Frame = +1

Query: 1   AIAEPMSAVVSRFRLSLIESNSQGLLSGCSL 93
           A A+PMS ++S+   SLI+ ++ GLLSGCS+
Sbjct: 14  AAADPMSKIISQLCSSLIQFDAHGLLSGCSV 44


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