BLASTX nr result

ID: Scutellaria23_contig00031544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00031544
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   195   4e-48
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              195   4e-48
dbj|BAF03494.1| XRCC4 homolog [Populus nigra]                         189   2e-46
ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   185   3e-45

>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  195 bits (495), Expect = 4e-48
 Identities = 95/128 (74%), Positives = 111/128 (86%)
 Frame = -3

Query: 403 GSVYGFSDAGNGCKRLSWTFEKEGTKLEWRWKCNPSSNCKKTTAEVLDFLMDANIRLSEE 224
           GSVYGFSDAG+G +RLSWTFEKEGTKLEWRWKC  S + + TTA VLDFLM+ANIRLSEE
Sbjct: 80  GSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRSTTAGVLDFLMNANIRLSEE 139

Query: 223 VVWKTQAFDKLKLEAEKCLAQSERLNGEKSEFESEIYGKFVKVLNSKKAKLRELRDRLSN 44
           VV KTQ+F++LK+EAEKCLAQSE+ N EK+EFES IY KF+ VLNSKKAKLRELRD++S 
Sbjct: 140 VVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFLGVLNSKKAKLRELRDQISK 199

Query: 43  KTTTNQSP 20
           + TT + P
Sbjct: 200 EETTGKLP 207


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  195 bits (495), Expect = 4e-48
 Identities = 95/128 (74%), Positives = 111/128 (86%)
 Frame = -3

Query: 403 GSVYGFSDAGNGCKRLSWTFEKEGTKLEWRWKCNPSSNCKKTTAEVLDFLMDANIRLSEE 224
           GSVYGFSDAG+G +RLSWTFEKEGTKLEWRWKC  S + + TTA VLDFLM+ANIRLSEE
Sbjct: 80  GSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRSTTAGVLDFLMNANIRLSEE 139

Query: 223 VVWKTQAFDKLKLEAEKCLAQSERLNGEKSEFESEIYGKFVKVLNSKKAKLRELRDRLSN 44
           VV KTQ+F++LK+EAEKCLAQSE+ N EK+EFES IY KF+ VLNSKKAKLRELRD++S 
Sbjct: 140 VVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFLGVLNSKKAKLRELRDQISK 199

Query: 43  KTTTNQSP 20
           + TT + P
Sbjct: 200 EETTGKLP 207


>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
          Length = 255

 Score =  189 bits (480), Expect = 2e-46
 Identities = 92/127 (72%), Positives = 106/127 (83%)
 Frame = -3

Query: 403 GSVYGFSDAGNGCKRLSWTFEKEGTKLEWRWKCNPSSNCKKTTAEVLDFLMDANIRLSEE 224
           GSVY F+DAG G KRLSWTFEKEGTKLEWRWKC PS + KKTT  +LDFLMDANIRLSEE
Sbjct: 78  GSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTKKTTTLILDFLMDANIRLSEE 137

Query: 223 VVWKTQAFDKLKLEAEKCLAQSERLNGEKSEFESEIYGKFVKVLNSKKAKLRELRDRLSN 44
           VV KTQ+F++LK EAEKCLAQSE+ N +K EFE+ +Y KF+ VLNSKK KLRELRD+LS 
Sbjct: 138 VVRKTQSFERLKGEAEKCLAQSEKFNSQKMEFEAAVYAKFLGVLNSKKRKLRELRDQLSK 197

Query: 43  KTTTNQS 23
           K  + +S
Sbjct: 198 KEISGES 204


>ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|222864766|gb|EEF01897.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  189 bits (479), Expect = 3e-46
 Identities = 92/127 (72%), Positives = 106/127 (83%)
 Frame = -3

Query: 403 GSVYGFSDAGNGCKRLSWTFEKEGTKLEWRWKCNPSSNCKKTTAEVLDFLMDANIRLSEE 224
           GSVY F+DAG G KRLSWTFEKEGTKLEWRWKC PS + KKTT  +LDFLMDANIRLSEE
Sbjct: 78  GSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTKKTTTLILDFLMDANIRLSEE 137

Query: 223 VVWKTQAFDKLKLEAEKCLAQSERLNGEKSEFESEIYGKFVKVLNSKKAKLRELRDRLSN 44
           VV KTQ+F++LK EAEKCLAQSE+ N +K EFE+ +Y KF+ VLNSKK KLRELRD+LS 
Sbjct: 138 VVRKTQSFEQLKGEAEKCLAQSEKFNSQKMEFEAAVYAKFLGVLNSKKRKLRELRDQLSK 197

Query: 43  KTTTNQS 23
           K  + +S
Sbjct: 198 KEISGES 204


>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score =  185 bits (470), Expect = 3e-45
 Identities = 90/128 (70%), Positives = 105/128 (82%)
 Frame = -3

Query: 403 GSVYGFSDAGNGCKRLSWTFEKEGTKLEWRWKCNPSSNCKKTTAEVLDFLMDANIRLSEE 224
           GS+Y F+DAG+  KRLSWTFEKEGTKLEWRWKC PS + K TTA +LDFLMDANIRLSEE
Sbjct: 85  GSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPSPDNKMTTAGILDFLMDANIRLSEE 144

Query: 223 VVWKTQAFDKLKLEAEKCLAQSERLNGEKSEFESEIYGKFVKVLNSKKAKLRELRDRLSN 44
           VV KT +F++LK EA+KCL QSER  GEK+EFES IY KF+ VLNSKK KLR+LRD+LS 
Sbjct: 145 VVKKTHSFERLKEEADKCLTQSERFAGEKTEFESSIYAKFLAVLNSKKRKLRQLRDQLSK 204

Query: 43  KTTTNQSP 20
           K  + + P
Sbjct: 205 KEASGKLP 212


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