BLASTX nr result

ID: Scutellaria23_contig00031457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00031457
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301798.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
gb|ACZ64261.1| RPM1 interacting protein 4 transcript 2 [Lactuca ...    95   5e-18
gb|ACZ64257.1| RPM1 interacting protein 4 transcript 2 [Lactuca ...    95   5e-18
gb|ACZ64259.1| RPM1 interacting protein 4 transcript 2b [Lactuca...    92   6e-17
gb|ACZ64258.1| RPM1 interacting protein 4 transcript 2a [Lactuca...    92   6e-17

>ref|XP_002301798.1| predicted protein [Populus trichocarpa] gi|222843524|gb|EEE81071.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  122 bits (306), Expect = 3e-26
 Identities = 65/120 (54%), Positives = 80/120 (66%), Gaps = 4/120 (3%)
 Frame = -1

Query: 350 RSSVPKFGNWENQDNVPYTVYFDKARKTR-GGKMINPNDPQDNPDMFXXXXXXXXXXXXX 174
           RS VPKFGNWE+++NVPYT YFDKARK R GGKMINPNDPQ+NPD+              
Sbjct: 4   RSHVPKFGNWESEENVPYTAYFDKARKGRTGGKMINPNDPQENPDLVSDYAAPDQAPPFR 63

Query: 173 XXXXXXXXIGRGAVRPAPEYRTSKEDGDHLRQLSNSQGRNENMVQRSSNEGS---YGGRG 3
                    G+GAVR A E+RTS+E+ D L+Q +NS  RNEN+ +R+S E +   YGGRG
Sbjct: 64  AKAPPEEAAGQGAVRQAHEHRTSREESD-LKQFANSPARNENLNRRASYEPAPQRYGGRG 122


>gb|ACZ64261.1| RPM1 interacting protein 4 transcript 2 [Lactuca viminea]
          Length = 243

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 56/119 (47%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
 Frame = -1

Query: 350 RSSVPKFGNWENQDNVPYTVYFDKARKTR-GGKMINPNDPQDNPDMFXXXXXXXXXXXXX 174
           R +VPKFGNWE++DNVPYTVYFDKARK + GGKMINPNDPQ+NP+MF             
Sbjct: 4   RPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMF---ADKTPPTAHR 60

Query: 173 XXXXXXXXIGRGAVRPAPEYRTSKEDGDHLRQLSNSQGRNENMVQRSSNEGSY--GGRG 3
                   +GR AVRP      S+E+ ++       Q  N+N+V+R+S   +Y  GG+G
Sbjct: 61  PRPQPEEPVGRRAVRP------SREENEY-------QPPNDNVVRRTSGGSAYQRGGQG 106


>gb|ACZ64257.1| RPM1 interacting protein 4 transcript 2 [Lactuca viminea]
          Length = 243

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 56/119 (47%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
 Frame = -1

Query: 350 RSSVPKFGNWENQDNVPYTVYFDKARKTR-GGKMINPNDPQDNPDMFXXXXXXXXXXXXX 174
           R +VPKFGNWE++DNVPYTVYFDKARK + GGKMINPNDPQ+NP+MF             
Sbjct: 4   RPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMF---ADKTPPTAHR 60

Query: 173 XXXXXXXXIGRGAVRPAPEYRTSKEDGDHLRQLSNSQGRNENMVQRSSNEGSY--GGRG 3
                   +GR AVRP      S+E+ ++       Q  N+N+V+R+S   +Y  GG+G
Sbjct: 61  SRPQPEEPVGRRAVRP------SREENEY-------QPPNDNVVRRTSGGSAYQRGGQG 106


>gb|ACZ64259.1| RPM1 interacting protein 4 transcript 2b [Lactuca tatarica]
          Length = 243

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 55/119 (46%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
 Frame = -1

Query: 350 RSSVPKFGNWENQDNVPYTVYFDKARKTR-GGKMINPNDPQDNPDMFXXXXXXXXXXXXX 174
           R +VPKFGNWE++DNVPYTVYFDKARK + GGKMINPNDPQ+NP+MF             
Sbjct: 4   RPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMF---ADKTPPTPPR 60

Query: 173 XXXXXXXXIGRGAVRPAPEYRTSKEDGDHLRQLSNSQGRNENMVQRSSNEGSY--GGRG 3
                   +GR AVRP      S+E+ ++       Q  N+N  +R+S   +Y  GG+G
Sbjct: 61  SRPQPEEPVGRRAVRP------SREENEY-------QPPNDNADRRTSGGSAYQRGGQG 106


>gb|ACZ64258.1| RPM1 interacting protein 4 transcript 2a [Lactuca tatarica]
          Length = 243

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 55/119 (46%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
 Frame = -1

Query: 350 RSSVPKFGNWENQDNVPYTVYFDKARKTR-GGKMINPNDPQDNPDMFXXXXXXXXXXXXX 174
           R +VPKFGNWE++DNVPYTVYFDKARK + GGKMINPNDPQ+NP+MF             
Sbjct: 4   RPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMF---ADKTPPTPPR 60

Query: 173 XXXXXXXXIGRGAVRPAPEYRTSKEDGDHLRQLSNSQGRNENMVQRSSNEGSY--GGRG 3
                   +GR AVRP      S+E+ ++       Q  N+N  +R+S   +Y  GG+G
Sbjct: 61  SRPQPEEPVGRRAVRP------SREENEY-------QPPNDNAGRRASGGSAYQRGGQG 106


Top