BLASTX nr result

ID: Scutellaria23_contig00031444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00031444
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   126   2e-27
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   117   1e-24
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic su...   115   4e-24
ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic su...   115   4e-24

>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/86 (67%), Positives = 70/86 (81%)
 Frame = -3

Query: 268 AGIVDCNGSGPTSGDKTTGGEEKLDFEMESDGSLPFYMLDAHEEIYGANAGNLYLFGKVK 89
           +GI++CN S      K    EEK DFE++SDGSLPF++LDAHEE+YG NAGN+YLFGKVK
Sbjct: 347 SGILNCNESEA----KLVNTEEKTDFELDSDGSLPFFILDAHEELYGTNAGNIYLFGKVK 402

Query: 88  SKGTYHSCCVVVKNMQRCVYAIPTVS 11
           + GTYHSCC+VVKNMQRCVYA+P  S
Sbjct: 403 AGGTYHSCCIVVKNMQRCVYAVPNGS 428


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
           vinifera]
          Length = 1522

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 6/86 (6%)
 Frame = -3

Query: 250 NGSGPTSG------DKTTGGEEKLDFEMESDGSLPFYMLDAHEEIYGANAGNLYLFGKVK 89
           NG  P++G      + +   EEK DF ++SDGSLPFY+LDAHEE YGAN GNLYLFGKVK
Sbjct: 307 NGGNPSAGYEGEVVNPSLNCEEKADFLLDSDGSLPFYILDAHEEFYGANMGNLYLFGKVK 366

Query: 88  SKGTYHSCCVVVKNMQRCVYAIPTVS 11
           +   YHSCCVVVKNM+RCVYAIP  S
Sbjct: 367 AGSAYHSCCVVVKNMERCVYAIPNDS 392


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 6/86 (6%)
 Frame = -3

Query: 250 NGSGPTSG------DKTTGGEEKLDFEMESDGSLPFYMLDAHEEIYGANAGNLYLFGKVK 89
           NG  P++G      + +   EEK DF ++SDGSLPFY+LDAHEE YGAN GNLYLFGKVK
Sbjct: 308 NGGNPSAGYEGEVVNPSLNCEEKADFLLDSDGSLPFYILDAHEEFYGANMGNLYLFGKVK 367

Query: 88  SKGTYHSCCVVVKNMQRCVYAIPTVS 11
           +   YHSCCVVVKNM+RCVYAIP  S
Sbjct: 368 AGSAYHSCCVVVKNMERCVYAIPNDS 393


>ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
           [Cucumis sativus]
          Length = 498

 Score =  115 bits (288), Expect = 4e-24
 Identities = 48/69 (69%), Positives = 62/69 (89%)
 Frame = -3

Query: 208 EEKLDFEMESDGSLPFYMLDAHEEIYGANAGNLYLFGKVKSKGTYHSCCVVVKNMQRCVY 29
           EEK +F+ ++DGSLPFY++DAHEE++GAN G +YLFGKVK+  T+HSCCVVVKNMQRC+Y
Sbjct: 351 EEKSEFDTDTDGSLPFYIVDAHEELFGANMGTVYLFGKVKAGDTFHSCCVVVKNMQRCIY 410

Query: 28  AIPTVSFMH 2
           AIP+ SF+H
Sbjct: 411 AIPSASFLH 419


>ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis
           sativus]
          Length = 1547

 Score =  115 bits (288), Expect = 4e-24
 Identities = 48/69 (69%), Positives = 62/69 (89%)
 Frame = -3

Query: 208 EEKLDFEMESDGSLPFYMLDAHEEIYGANAGNLYLFGKVKSKGTYHSCCVVVKNMQRCVY 29
           EEK +F+ ++DGSLPFY++DAHEE++GAN G +YLFGKVK+  T+HSCCVVVKNMQRC+Y
Sbjct: 351 EEKSEFDTDTDGSLPFYIVDAHEELFGANMGTVYLFGKVKAGDTFHSCCVVVKNMQRCIY 410

Query: 28  AIPTVSFMH 2
           AIP+ SF+H
Sbjct: 411 AIPSASFLH 419


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