BLASTX nr result

ID: Scutellaria23_contig00031423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00031423
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298671.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002520617.1| pentatricopeptide repeat-containing protein,...    80   2e-13
ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12
ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    74   1e-11

>ref|XP_002298671.1| predicted protein [Populus trichocarpa] gi|222845929|gb|EEE83476.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/76 (59%), Positives = 58/76 (76%)
 Frame = -3

Query: 230 LIKIKQCTKLHLPIHGKKLHARVIKSGLNLYGPLFPNTLIDMYGKCSHLEDAVQLFDEMP 51
           L ++K CTK   P++ KK+HA+++KSGLN   PL PNTL+D YGKC+ L+DA  LFDEMP
Sbjct: 6   LHRLKLCTKHQAPLNAKKIHAQIVKSGLNQCQPL-PNTLLDAYGKCNLLQDAHYLFDEMP 64

Query: 50  KRDLASWTSIFTAHNQ 3
           +RD  SW SI TA+NQ
Sbjct: 65  QRDHVSWASILTAYNQ 80


>ref|XP_002520617.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540178|gb|EEF41753.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 344

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/81 (50%), Positives = 53/81 (65%)
 Frame = -3

Query: 248 MHHSEILIKIKQCTKLHLPIHGKKLHARVIKSGLNLYGPLFPNTLIDMYGKCSHLEDAVQ 69
           M  S  L +++ C K   P+  KKLHA++IK  L    PL PNTL++ YGKC  L+DA  
Sbjct: 1   MQISHYLHQLQLCGKRQTPLTAKKLHAQIIKLSLKESEPL-PNTLLNAYGKCGLLQDAYF 59

Query: 68  LFDEMPKRDLASWTSIFTAHN 6
           LF+EMP+RD  SW SI TA+N
Sbjct: 60  LFEEMPQRDHVSWASILTAYN 80


>ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Glycine max]
          Length = 611

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/63 (53%), Positives = 49/63 (77%)
 Frame = -3

Query: 194 PIHGKKLHARVIKSGLNLYGPLFPNTLIDMYGKCSHLEDAVQLFDEMPKRDLASWTSIFT 15
           P+  KKLHA++IK+GLN + P+ PNTL++ YGKC  ++DA+QLFD +P+RD  +W S+ T
Sbjct: 19  PLLAKKLHAQIIKAGLNQHEPI-PNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLT 77

Query: 14  AHN 6
           A N
Sbjct: 78  ACN 80


>ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/82 (43%), Positives = 55/82 (67%)
 Frame = -3

Query: 248 MHHSEILIKIKQCTKLHLPIHGKKLHARVIKSGLNLYGPLFPNTLIDMYGKCSHLEDAVQ 69
           M +S ++ +++ C +   P  GKKLH  +IK+G++    L  N LI+MYGKC  ++DA+ 
Sbjct: 1   MCYSHLVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSL-SNNLINMYGKCGLIQDALN 59

Query: 68  LFDEMPKRDLASWTSIFTAHNQ 3
           LF+++P RD  SW SI TA+NQ
Sbjct: 60  LFNQLPHRDPISWASILTANNQ 81


>ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/82 (43%), Positives = 52/82 (63%)
 Frame = -3

Query: 248 MHHSEILIKIKQCTKLHLPIHGKKLHARVIKSGLNLYGPLFPNTLIDMYGKCSHLEDAVQ 69
           M+ S  L +++ C +        +LH+++IK+G +    L  NTL+D+YGKC  +  A+Q
Sbjct: 1   MNISHFLHQLQLCARRQSASAAGELHSQIIKAGFDK-SSLLSNTLLDVYGKCGLIPQALQ 59

Query: 68  LFDEMPKRDLASWTSIFTAHNQ 3
           LFDEMP RD  SW SI TAHN+
Sbjct: 60  LFDEMPNRDHVSWASILTAHNK 81


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