BLASTX nr result

ID: Scutellaria23_contig00031412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00031412
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    71   8e-11
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    69   3e-10
gb|AFK44336.1| unknown [Lotus japonicus]                               68   9e-10
ref|XP_003591729.1| F-box protein [Medicago truncatula] gi|35834...    61   1e-07

>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
 Frame = -2

Query: 312 LPXXXXXXILSRIPVKSLLKFRCVSKKWRSLIGAKRFFKAHLEK----SMKNPSFERHKV 145
           LP      ILSR+P KSL+KFRCVSK ++SLI   +F K HLEK    S  +P F    V
Sbjct: 79  LPHELIIEILSRLPAKSLIKFRCVSKSFKSLISNPQFIKTHLEKVKNLSRNDPDFSPEIV 138

Query: 144 IARTMPPYYELKHYSLHSLLNDPSTDSSAID 52
           I+ +  P + LK  SL+S+ N+P TD+  ID
Sbjct: 139 IS-SSEPLFRLKSCSLYSVYNNPVTDAVVID 168


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 41/88 (46%), Positives = 49/88 (55%)
 Frame = -2

Query: 312 LPXXXXXXILSRIPVKSLLKFRCVSKKWRSLIGAKRFFKAHLEKSMKNPSFERHKVIART 133
           LP      ILSR+PVKSLL+FRCV K W SLI    F K HL  S +   F  H++I   
Sbjct: 49  LPDELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSSRCTHFTHHRIILSA 108

Query: 132 MPPYYELKHYSLHSLLNDPSTDSSAIDD 49
               + LK  SL SL N+PS  S+  DD
Sbjct: 109 TTAEFHLKSCSLSSLFNNPS--STVCDD 134


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/99 (42%), Positives = 54/99 (54%)
 Frame = -2

Query: 366 SSRRSEMDIVQSSDQPLCLPXXXXXXILSRIPVKSLLKFRCVSKKWRSLIGAKRFFKAHL 187
           SS + +  + +S   P  LP      ILSR+PVKSLL+FRCV K W SLI    F K HL
Sbjct: 32  SSVQKQQGMSESLPLPF-LPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHL 90

Query: 186 EKSMKNPSFERHKVIARTMPPYYELKHYSLHSLLNDPST 70
             S ++  F  H++I       + LK  SL SL N+ ST
Sbjct: 91  HLSSRSTHFTHHRIILSATTAEFHLKSCSLSSLFNNLST 129


>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/81 (45%), Positives = 44/81 (54%)
 Frame = -2

Query: 312 LPXXXXXXILSRIPVKSLLKFRCVSKKWRSLIGAKRFFKAHLEKSMKNPSFERHKVIART 133
           LP      ILSR+PVKSLLKFRCV K W  LI    F K HL  S ++  F  H++I   
Sbjct: 63  LPDELVVEILSRLPVKSLLKFRCVCKSWMLLISDPYFIKKHLHLSKQSTLFNHHRIILSA 122

Query: 132 MPPYYELKHYSLHSLLNDPST 70
               + LK  S+ SL N  ST
Sbjct: 123 TTAEFHLKSCSVSSLFNSTST 143


>ref|XP_003591729.1| F-box protein [Medicago truncatula]
           gi|358344565|ref|XP_003636359.1| F-box protein [Medicago
           truncatula] gi|355480777|gb|AES61980.1| F-box protein
           [Medicago truncatula] gi|355502294|gb|AES83497.1| F-box
           protein [Medicago truncatula]
          Length = 395

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/95 (40%), Positives = 53/95 (55%)
 Frame = -2

Query: 333 SSDQPLCLPXXXXXXILSRIPVKSLLKFRCVSKKWRSLIGAKRFFKAHLEKSMKNPSFER 154
           +S  P+ LP      +L+ + VKSL + +CVSK W SLI    F K HL+KS + P    
Sbjct: 13  NSPSPVILPDDLIAEVLAFLDVKSLTQLKCVSKSWYSLISDPFFVKLHLDKSSQKPHLAV 72

Query: 153 HKVIARTMPPYYELKHYSLHSLLNDPSTDSSAIDD 49
               A+ +  + +L  +SLH LL + STD S IDD
Sbjct: 73  FS--AQFLTQHGQLTAFSLHRLLENQSTDVS-IDD 104


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