BLASTX nr result

ID: Scutellaria23_contig00031289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00031289
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subuni...   170   1e-40
emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]   170   1e-40
ref|NP_973664.1| DNA polymerase delta subunit 2 [Arabidopsis tha...   164   5e-39
ref|XP_002309305.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38
ref|XP_002881822.1| hypothetical protein ARALYDRAFT_483299 [Arab...   160   8e-38

>ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
           gi|297739835|emb|CBI30017.3| unnamed protein product
           [Vitis vinifera]
          Length = 439

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/99 (81%), Positives = 88/99 (88%)
 Frame = -1

Query: 368 MEVDSENGLLQRKQSMYTFLDESFEIQKEIYRGQQYSQIYFTRLHLMRTLLYSLLPTWKP 189
           ME+D+E  L QRKQS+Y  LDE F I+KE YRGQQYSQIYF RLH+MRTL+YSL+P WKP
Sbjct: 1   MEIDAEKHL-QRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKP 59

Query: 188 HLPVCTVLGLEEGKECIIVGTLYKHMKLKPSILDEYSKE 72
           HLPVCTVLGLEEGKECIIVGTLYKHMKLKP ILDEYSKE
Sbjct: 60  HLPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKE 98


>emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
          Length = 439

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/99 (81%), Positives = 88/99 (88%)
 Frame = -1

Query: 368 MEVDSENGLLQRKQSMYTFLDESFEIQKEIYRGQQYSQIYFTRLHLMRTLLYSLLPTWKP 189
           ME+D+E  L QRKQS+Y  LDE F I+KE YRGQQYSQIYF RLH+MRTL+YSL+P WKP
Sbjct: 1   MEIDAEKHL-QRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKP 59

Query: 188 HLPVCTVLGLEEGKECIIVGTLYKHMKLKPSILDEYSKE 72
           HLPVCTVLGLEEGKECIIVGTLYKHMKLKP ILDEYSKE
Sbjct: 60  HLPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKE 98


>ref|NP_973664.1| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
           gi|322510023|sp|O48520.2|DPOD2_ARATH RecName: Full=DNA
           polymerase delta small subunit
           gi|22531160|gb|AAM97084.1| putative DNA polymerase delta
           small subunit [Arabidopsis thaliana]
           gi|31376377|gb|AAP49515.1| At2g42120 [Arabidopsis
           thaliana] gi|62320658|dbj|BAD95325.1| DNA polymerase
           delta small subunit like protein [Arabidopsis thaliana]
           gi|330254978|gb|AEC10072.1| DNA polymerase delta subunit
           2 [Arabidopsis thaliana]
          Length = 440

 Score =  164 bits (416), Expect = 5e-39
 Identities = 80/99 (80%), Positives = 87/99 (87%)
 Frame = -1

Query: 368 MEVDSENGLLQRKQSMYTFLDESFEIQKEIYRGQQYSQIYFTRLHLMRTLLYSLLPTWKP 189
           ME+DSE  + +RKQS Y  LDE FEIQKE+YRGQQYSQIYF RLHLMRTLLYSL PTWK 
Sbjct: 1   MEIDSEK-IHERKQSDYNSLDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKS 59

Query: 188 HLPVCTVLGLEEGKECIIVGTLYKHMKLKPSILDEYSKE 72
           HLPVC VLGLE+GKECIIVGTL+KHMKLKP +LDEYSKE
Sbjct: 60  HLPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKE 98


>ref|XP_002309305.1| predicted protein [Populus trichocarpa] gi|222855281|gb|EEE92828.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/99 (78%), Positives = 86/99 (86%)
 Frame = -1

Query: 368 MEVDSENGLLQRKQSMYTFLDESFEIQKEIYRGQQYSQIYFTRLHLMRTLLYSLLPTWKP 189
           ME+D E  + QRK+S Y  LDE+F+IQ E YRGQQYSQIYF RLHLMRTLLYSL+  WKP
Sbjct: 4   MEIDIEKNI-QRKRSTYQSLDETFDIQNETYRGQQYSQIYFARLHLMRTLLYSLVTHWKP 62

Query: 188 HLPVCTVLGLEEGKECIIVGTLYKHMKLKPSILDEYSKE 72
           H+PVCTVLGLEEGKECIIVGTLYKHMKLKP +LDEYSKE
Sbjct: 63  HVPVCTVLGLEEGKECIIVGTLYKHMKLKPCVLDEYSKE 101


>ref|XP_002881822.1| hypothetical protein ARALYDRAFT_483299 [Arabidopsis lyrata subsp.
           lyrata] gi|297327661|gb|EFH58081.1| hypothetical protein
           ARALYDRAFT_483299 [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/100 (79%), Positives = 87/100 (87%), Gaps = 1/100 (1%)
 Frame = -1

Query: 368 MEVDSENGLLQRKQSMYTFL-DESFEIQKEIYRGQQYSQIYFTRLHLMRTLLYSLLPTWK 192
           ME+DSE  + +RK S Y  L DE FEIQKE+YRGQQYSQIYF RLHLMRTLLYSL PTWK
Sbjct: 1   MEIDSEK-IHERKHSDYNSLQDERFEIQKEMYRGQQYSQIYFVRLHLMRTLLYSLAPTWK 59

Query: 191 PHLPVCTVLGLEEGKECIIVGTLYKHMKLKPSILDEYSKE 72
           PHLPVC VLGLE+GKEC+IVGTL+KHMKLKP +LDEYSKE
Sbjct: 60  PHLPVCKVLGLEKGKECVIVGTLFKHMKLKPCVLDEYSKE 99


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