BLASTX nr result

ID: Scutellaria23_contig00031151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00031151
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu...   284   9e-75
ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei...   281   7e-74
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   280   1e-73
emb|CBI34863.3| unnamed protein product [Vitis vinifera]              280   1e-73
ref|XP_002870701.1| EMB3012 [Arabidopsis lyrata subsp. lyrata] g...   278   8e-73

>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
           gi|223539369|gb|EEF40960.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 2256

 Score =  284 bits (727), Expect = 9e-75
 Identities = 133/157 (84%), Positives = 145/157 (92%)
 Frame = +1

Query: 175 GPHIADVNILLPPKMTHPVEYRLQGSDGCFRWSWDHHDVLSVLPELNSTSHCSTSARLRS 354
           GPHI DVNILLPPKMTHPVEYRLQGSDGCF+WSWDHHD+LSVLPE N +SHCSTSARLRS
Sbjct: 27  GPHITDVNILLPPKMTHPVEYRLQGSDGCFKWSWDHHDILSVLPEYNLSSHCSTSARLRS 86

Query: 355 IAPYGGRKETAVYATDLNTGMVIRCKVYIDTISRIQIFHNSIKLDLDGLATLRVRAFDSE 534
           IAP+ GRKETAVYA D+N+G+VIRCKV+ID ISRIQIFHNSIKLDLDGLATL+VRAFDS 
Sbjct: 87  IAPFSGRKETAVYAADVNSGIVIRCKVFIDNISRIQIFHNSIKLDLDGLATLQVRAFDSA 146

Query: 535 ENVFSSLVGLQFMWQLMPETHGLPHSLVHVPLKDSPL 645
           +NVFSSLVGLQFMW L+PET  LPH L HVPLK+SPL
Sbjct: 147 DNVFSSLVGLQFMWHLLPETGELPHHLAHVPLKESPL 183


>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine
           max]
          Length = 2304

 Score =  281 bits (719), Expect = 7e-74
 Identities = 135/157 (85%), Positives = 145/157 (92%)
 Frame = +1

Query: 175 GPHIADVNILLPPKMTHPVEYRLQGSDGCFRWSWDHHDVLSVLPELNSTSHCSTSARLRS 354
           GPHIADVNILLPPKMT PV+YRLQGSDGCF+WSWDHHD+LSV PE NS+S CSTSAR+RS
Sbjct: 24  GPHIADVNILLPPKMTFPVDYRLQGSDGCFQWSWDHHDILSVEPEYNSSSKCSTSARIRS 83

Query: 355 IAPYGGRKETAVYATDLNTGMVIRCKVYIDTISRIQIFHNSIKLDLDGLATLRVRAFDSE 534
           IAPY GRKETAVYA DL TG+VIRCKV+ID ISRIQIFHNSIKLDL+GLATLRVRAFDSE
Sbjct: 84  IAPYSGRKETAVYAADLQTGIVIRCKVFIDNISRIQIFHNSIKLDLEGLATLRVRAFDSE 143

Query: 535 ENVFSSLVGLQFMWQLMPETHGLPHSLVHVPLKDSPL 645
           ENVFSSLVGLQFMW LMPE +GLP  LV+VPLKDSPL
Sbjct: 144 ENVFSSLVGLQFMWSLMPEANGLPCHLVNVPLKDSPL 180


>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
           vinifera]
          Length = 2363

 Score =  280 bits (717), Expect = 1e-73
 Identities = 134/157 (85%), Positives = 144/157 (91%)
 Frame = +1

Query: 175 GPHIADVNILLPPKMTHPVEYRLQGSDGCFRWSWDHHDVLSVLPELNSTSHCSTSARLRS 354
           GPHIADVNILLPPKMT+PVEY LQGS GCF+WSWDHHD+LSVLPE N +S CSTSARL+S
Sbjct: 106 GPHIADVNILLPPKMTYPVEYLLQGSGGCFKWSWDHHDILSVLPEYNVSSQCSTSARLKS 165

Query: 355 IAPYGGRKETAVYATDLNTGMVIRCKVYIDTISRIQIFHNSIKLDLDGLATLRVRAFDSE 534
           IA Y GRKETAVYA D++TG+V+RCKV+ID ISRIQIFHNSIKLDLDGLATLRVRAFDSE
Sbjct: 166 IATYNGRKETAVYAADIHTGIVVRCKVFIDNISRIQIFHNSIKLDLDGLATLRVRAFDSE 225

Query: 535 ENVFSSLVGLQFMWQLMPETHGLPHSLVHVPLKDSPL 645
           ENVFSSLVGLQFMWQL PET GLP  LVHVPLKDSPL
Sbjct: 226 ENVFSSLVGLQFMWQLRPETDGLPPHLVHVPLKDSPL 262


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  280 bits (717), Expect = 1e-73
 Identities = 134/157 (85%), Positives = 144/157 (91%)
 Frame = +1

Query: 175 GPHIADVNILLPPKMTHPVEYRLQGSDGCFRWSWDHHDVLSVLPELNSTSHCSTSARLRS 354
           GPHIADVNILLPPKMT+PVEY LQGS GCF+WSWDHHD+LSVLPE N +S CSTSARL+S
Sbjct: 31  GPHIADVNILLPPKMTYPVEYLLQGSGGCFKWSWDHHDILSVLPEYNVSSQCSTSARLKS 90

Query: 355 IAPYGGRKETAVYATDLNTGMVIRCKVYIDTISRIQIFHNSIKLDLDGLATLRVRAFDSE 534
           IA Y GRKETAVYA D++TG+V+RCKV+ID ISRIQIFHNSIKLDLDGLATLRVRAFDSE
Sbjct: 91  IATYNGRKETAVYAADIHTGIVVRCKVFIDNISRIQIFHNSIKLDLDGLATLRVRAFDSE 150

Query: 535 ENVFSSLVGLQFMWQLMPETHGLPHSLVHVPLKDSPL 645
           ENVFSSLVGLQFMWQL PET GLP  LVHVPLKDSPL
Sbjct: 151 ENVFSSLVGLQFMWQLRPETDGLPPHLVHVPLKDSPL 187


>ref|XP_002870701.1| EMB3012 [Arabidopsis lyrata subsp. lyrata]
           gi|297316537|gb|EFH46960.1| EMB3012 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1918

 Score =  278 bits (710), Expect = 8e-73
 Identities = 130/157 (82%), Positives = 142/157 (90%)
 Frame = +1

Query: 175 GPHIADVNILLPPKMTHPVEYRLQGSDGCFRWSWDHHDVLSVLPELNSTSHCSTSARLRS 354
           GPHI DVNILLPPKM +PVEYRLQGSDGCF+WSWDHHD+LSV PE NS+SHCSTSARLRS
Sbjct: 27  GPHITDVNILLPPKMKNPVEYRLQGSDGCFKWSWDHHDILSVTPEFNSSSHCSTSARLRS 86

Query: 355 IAPYGGRKETAVYATDLNTGMVIRCKVYIDTISRIQIFHNSIKLDLDGLATLRVRAFDSE 534
           I+PY GRKETAVYATD+ TGMVIRCKV+ID  SRIQIFHNSIKLDLDGL+ LRVRAFD+E
Sbjct: 87  ISPYSGRKETAVYATDIQTGMVIRCKVFIDNFSRIQIFHNSIKLDLDGLSMLRVRAFDNE 146

Query: 535 ENVFSSLVGLQFMWQLMPETHGLPHSLVHVPLKDSPL 645
           EN FSSLVGLQFMW+LMPE+ G  H L HVPLK+SPL
Sbjct: 147 ENEFSSLVGLQFMWKLMPESGGSTHHLAHVPLKESPL 183


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