BLASTX nr result
ID: Scutellaria23_contig00030984
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria23_contig00030984
(416 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containi... 184 5e-45
ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containi... 179 2e-43
ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 168 4e-40
ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containi... 168 4e-40
ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago t... 167 6e-40
>ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 184 bits (468), Expect = 5e-45
Identities = 83/136 (61%), Positives = 109/136 (80%)
Frame = +1
Query: 1 WIHKYVKKVKMPVSVRLGTALIDMYSKCGCLDMAEKVFDKMPQRDVICWNTMISGCAMNG 180
W+H+Y+ ++ P+SVRL T LIDMY+KCG LD+A+K+FD M QRD ICWN MISG AMNG
Sbjct: 258 WVHRYLDQLGHPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICWNAMISGMAMNG 317
Query: 181 DGGSALRLFEEMQKSGIRPDGVTFISLFTACSNSDMVHEGLDLLYDMFDVHDIELKPEHY 360
DG +ALRLF EM+K+G++PD +TFI++FTACS S M HE + LL M V+++E K EHY
Sbjct: 318 DGDNALRLFSEMEKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNSMCTVYNMEPKSEHY 377
Query: 361 GCIIELLGRVRLVEEA 408
GCI++LLGR L++EA
Sbjct: 378 GCIVDLLGRAGLLKEA 393
Score = 56.2 bits (134), Expect = 3e-06
Identities = 26/83 (31%), Positives = 45/83 (54%)
Frame = +1
Query: 55 TALIDMYSKCGCLDMAEKVFDKMPQRDVICWNTMISGCAMNGDGGSALRLFEEMQKSGIR 234
T +I Y+K G ++ A +FD+ P +D W ++ISG N L++F MQ +G+
Sbjct: 175 TVMISGYAKVGDVETARMLFDEAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGLE 234
Query: 235 PDGVTFISLFTACSNSDMVHEGL 303
PD +S+ AC++ + G+
Sbjct: 235 PDEAILVSILCACAHLGAMEIGV 257
>ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 179 bits (454), Expect = 2e-43
Identities = 77/136 (56%), Positives = 109/136 (80%)
Frame = +1
Query: 1 WIHKYVKKVKMPVSVRLGTALIDMYSKCGCLDMAEKVFDKMPQRDVICWNTMISGCAMNG 180
WIH+Y+ + + +S+RL T+L+DMY+KCG L++A+++FD MP+RD++CWN MISG AM+G
Sbjct: 258 WIHRYLNRKTVSLSIRLSTSLLDMYAKCGNLELAKRLFDSMPERDIVCWNAMISGLAMHG 317
Query: 181 DGGSALRLFEEMQKSGIRPDGVTFISLFTACSNSDMVHEGLDLLYDMFDVHDIELKPEHY 360
DG SAL++F EM+K+GI+PD +TFI++FTACS S M HEGL LL M +++IE K EHY
Sbjct: 318 DGASALKMFSEMEKTGIKPDDITFIAVFTACSYSGMAHEGLQLLDKMSSLYEIEPKSEHY 377
Query: 361 GCIIELLGRVRLVEEA 408
GC+++LL R L EA
Sbjct: 378 GCLVDLLSRAGLFGEA 393
Score = 58.5 bits (140), Expect = 5e-07
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 31/131 (23%)
Frame = +1
Query: 4 IHKYVKKVKMPVSVRLGTALIDMYSKCGCLDMAEKVFDKMPQRDVICWNTMISGCAMNGD 183
+H Y K+ + + +G +L+ MYS CG + A VFD+MP+ + W+ MISG A GD
Sbjct: 127 VHGYSSKLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEMPRLSAVSWSVMISGYAKVGD 186
Query: 184 GGSA-------------------------------LRLFEEMQKSGIRPDGVTFISLFTA 270
SA L LF +Q + + PD F+S+ +A
Sbjct: 187 VDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESIFVSILSA 246
Query: 271 CSNSDMVHEGL 303
C++ + G+
Sbjct: 247 CAHLGALDIGI 257
>ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 168 bits (426), Expect = 4e-40
Identities = 76/136 (55%), Positives = 106/136 (77%)
Frame = +1
Query: 1 WIHKYVKKVKMPVSVRLGTALIDMYSKCGCLDMAEKVFDKMPQRDVICWNTMISGCAMNG 180
WIH+Y+ ++ +P+++R+ T LIDMY+KCG LD+A+ +F++M QRD +CWN MISG AM+G
Sbjct: 258 WIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317
Query: 181 DGGSALRLFEEMQKSGIRPDGVTFISLFTACSNSDMVHEGLDLLYDMFDVHDIELKPEHY 360
DG A++LF EM+K+GI+PD +TFI+++ ACSNS MV EG+ + M VH IE K EHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVWXACSNSGMVDEGIRIWNRMSTVHKIEPKSEHY 377
Query: 361 GCIIELLGRVRLVEEA 408
GC+I+LL RV EEA
Sbjct: 378 GCVIDLLSRVGRFEEA 393
>ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 168 bits (426), Expect = 4e-40
Identities = 76/136 (55%), Positives = 105/136 (77%)
Frame = +1
Query: 1 WIHKYVKKVKMPVSVRLGTALIDMYSKCGCLDMAEKVFDKMPQRDVICWNTMISGCAMNG 180
WIH+Y+ ++ +P+++R+ T LIDMY+KCG LD+A+ +F++M QRD +CWN MISG AM+G
Sbjct: 258 WIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317
Query: 181 DGGSALRLFEEMQKSGIRPDGVTFISLFTACSNSDMVHEGLDLLYDMFDVHDIELKPEHY 360
DG A++LF EM+K+GI+PD +TFI++ ACSNS MV EG+ + M VH IE K EHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTVHKIEPKSEHY 377
Query: 361 GCIIELLGRVRLVEEA 408
GC+I+LL RV EEA
Sbjct: 378 GCVIDLLSRVGRFEEA 393
>ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 525
Score = 167 bits (424), Expect = 6e-40
Identities = 77/137 (56%), Positives = 108/137 (78%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 WIHKYVKKVKM-PVSVRLGTALIDMYSKCGCLDMAEKVFDKMPQRDVICWNTMISGCAMN 177
WIH+++ ++K+ P+SVRL T+L+DMY+KCG L++A+++FD M RDV+CWN MISG AM+
Sbjct: 260 WIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNAMISGMAMH 319
Query: 178 GDGGSALRLFEEMQKSGIRPDGVTFISLFTACSNSDMVHEGLDLLYDMFDVHDIELKPEH 357
GDG AL+LF +M+K G++PD +TFI++FTACS S M +EGL LL M V++I K EH
Sbjct: 320 GDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYNIVPKSEH 379
Query: 358 YGCIIELLGRVRLVEEA 408
YGC+++LL R L EEA
Sbjct: 380 YGCLVDLLSRAGLFEEA 396
Score = 55.8 bits (133), Expect = 3e-06
Identities = 29/83 (34%), Positives = 45/83 (54%)
Frame = +1
Query: 55 TALIDMYSKCGCLDMAEKVFDKMPQRDVICWNTMISGCAMNGDGGSALRLFEEMQKSGIR 234
+ +I Y+K G +D A FD+ P++D W MISG N +L LF MQ + I
Sbjct: 177 SVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIV 236
Query: 235 PDGVTFISLFTACSNSDMVHEGL 303
PD F+S+ +AC++ + G+
Sbjct: 237 PDESIFVSILSACAHLGALEIGV 259