BLASTX nr result

ID: Scutellaria23_contig00030980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030980
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520390.1| conserved hypothetical protein [Ricinus comm...    89   3e-16
ref|XP_003598665.1| Integrator complex subunit [Medicago truncat...    82   3e-14
ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo...    82   4e-14
ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator c...    78   6e-13
ref|NP_187409.2| integrator complex subunit 9 [Arabidopsis thali...    78   8e-13

>ref|XP_002520390.1| conserved hypothetical protein [Ricinus communis]
           gi|223540437|gb|EEF42006.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 705

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/81 (55%), Positives = 62/81 (76%)
 Frame = +1

Query: 1   AFSSGLEIGSCNWSITGPKGNIAYVSSSVFTSLTAMSFNYKALQGSDVLLYSDFSSCDAP 180
           AFSSG+EIGSCNW I GPK N+A+VSSS+F S  AM F+Y AL+G+D++LYSDFSS D  
Sbjct: 234 AFSSGIEIGSCNWLIEGPKENMAWVSSSIFLSTHAMEFDYHALRGTDLILYSDFSSQDVI 293

Query: 181 DHSDEDYSNLPVSSGNDISNL 243
           +   E + +  VS+ +++S+L
Sbjct: 294 E-DVEQHESYFVSANHNLSSL 313


>ref|XP_003598665.1| Integrator complex subunit [Medicago truncatula]
           gi|355487713|gb|AES68916.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 536

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/74 (58%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
 Frame = +1

Query: 1   AFSSGLEIGSCNWSITGPKGNIAYVSSSVFTSLTAMSFNYKALQGSDVLLYSDFSS-CDA 177
           AFSSG+EIGS NW++ GPKG+IAY+SSS F S  AM+F+Y +LQ +  L+YSDFSS  DA
Sbjct: 38  AFSSGVEIGSSNWTLNGPKGDIAYLSSSCFFSAHAMAFDYSSLQRTSTLIYSDFSSLIDA 97

Query: 178 PDHSDEDYSNLPVS 219
            D  D D    P S
Sbjct: 98  QDVEDGDNYTDPTS 111


>ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
           gi|296081277|emb|CBI17721.3| unnamed protein product
           [Vitis vinifera]
          Length = 774

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 40/73 (54%), Positives = 52/73 (71%)
 Frame = +1

Query: 1   AFSSGLEIGSCNWSITGPKGNIAYVSSSVFTSLTAMSFNYKALQGSDVLLYSDFSSCDAP 180
           A SSGLEIG+CNW+I GPK NIA +SSS+F S  AM+F+Y AL+G+D+++YSD SS    
Sbjct: 306 AVSSGLEIGTCNWTINGPKRNIACLSSSIFNSSHAMNFDYHALRGNDLIIYSDLSSPVLE 365

Query: 181 DHSDEDYSNLPVS 219
           D  D    + P S
Sbjct: 366 DVKDNSCYSAPTS 378


>ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9-like
           [Glycine max]
          Length = 794

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   AFSSGLEIGSCNWSITGPKGNIAYVSSSVFTSLTAMSFNYKALQGSDVLLYSDFSSC-DA 177
           AFSSG+EIGSCNW +  PKG+IAY+S S F S  AM F+Y +LQG+ VL+YSDF S  D 
Sbjct: 322 AFSSGIEIGSCNWILNSPKGDIAYLSGSSFISAHAMPFDYHSLQGTCVLIYSDFLSLGDT 381

Query: 178 PDHSDEDYSNLPVSSGNDI 234
            D  + D  N  VS+ + +
Sbjct: 382 QDGENGD--NYSVSTADKL 398


>ref|NP_187409.2| integrator complex subunit 9 [Arabidopsis thaliana]
           gi|332641036|gb|AEE74557.1| integrator complex subunit 9
           [Arabidopsis thaliana]
          Length = 699

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/81 (49%), Positives = 55/81 (67%)
 Frame = +1

Query: 1   AFSSGLEIGSCNWSITGPKGNIAYVSSSVFTSLTAMSFNYKALQGSDVLLYSDFSSCDAP 180
           A SSGL+IG+CNW I GP G+++YVS S+F S  A SF++  L+ +DVL+YSDFSS  + 
Sbjct: 231 ALSSGLDIGACNWLINGPNGSLSYVSDSIFVSHHARSFDFHGLKETDVLIYSDFSSLQSA 290

Query: 181 DHSDEDYSNLPVSSGNDISNL 243
           + + ED    P S  N IS +
Sbjct: 291 EVT-EDGCISPDSDNNYISTI 310


Top