BLASTX nr result

ID: Scutellaria23_contig00030967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030967
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containi...    68   7e-10
ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containi...    63   3e-08
ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07

>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/104 (41%), Positives = 69/104 (66%)
 Frame = +3

Query: 3   RVNMYDSAKLVYDYMKADRIVPNNSLVDYLISSFANAGKFKIAEGILIAKGELCNHREVV 182
           +V + DSAK+V+D M++D I+P++S+++ L+SS+A  GK   A+  L    E+  +   V
Sbjct: 121 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFL---NEVHCYGIKV 177

Query: 183 SPFVCNKFLSLLISRNQVDDAVMFFRGHVLRSKSFRPDNFTFNI 314
           SPFV N  L++L+ +N VD+AV+ FR H+     F PD ++FNI
Sbjct: 178 SPFVYNNLLNMLVKQNLVDEAVLLFREHL--EPYFVPDVYSFNI 219


>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/104 (41%), Positives = 69/104 (66%)
 Frame = +3

Query: 3   RVNMYDSAKLVYDYMKADRIVPNNSLVDYLISSFANAGKFKIAEGILIAKGELCNHREVV 182
           +V + DSAK+V+D M++D I+P++S+++ L+SS+A  GK   A+  L    E+  +   V
Sbjct: 121 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFL---NEVHCYGIKV 177

Query: 183 SPFVCNKFLSLLISRNQVDDAVMFFRGHVLRSKSFRPDNFTFNI 314
           SPFV N  L++L+ +N VD+AV+ FR H+     F PD ++FNI
Sbjct: 178 SPFVYNNLLNMLVKQNLVDEAVLLFREHL--EPYFVPDVYSFNI 219


>ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 544

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/104 (39%), Positives = 69/104 (66%)
 Frame = +3

Query: 3   RVNMYDSAKLVYDYMKADRIVPNNSLVDYLISSFANAGKFKIAEGILIAKGELCNHREVV 182
           +  +++SAKL+YD M++D  +P++ L+ +L+SSFA A +F +++  L+A+ +    +  V
Sbjct: 120 QAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRFDVSKE-LLAEAQCSGVQ--V 176

Query: 183 SPFVCNKFLSLLISRNQVDDAVMFFRGHVLRSKSFRPDNFTFNI 314
              V N FL++LI  N++DDA+  FR  ++RS S   D FTFNI
Sbjct: 177 DVIVYNNFLNILIKHNRLDDAICLFR-ELMRSHSCL-DAFTFNI 218


>ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 511

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/104 (35%), Positives = 66/104 (63%)
 Frame = +3

Query: 3   RVNMYDSAKLVYDYMKADRIVPNNSLVDYLISSFANAGKFKIAEGILIAKGELCNHREVV 182
           R N++ +AK+VYD+M+ D  +P+N L+ +L+SS+A  G+  ++  +L      CN+   V
Sbjct: 84  RSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVSSYAIVGRLDVSRELL--ADVQCNN-VGV 140

Query: 183 SPFVCNKFLSLLISRNQVDDAVMFFRGHVLRSKSFRPDNFTFNI 314
           +  V N   ++LI +N+V DAV+ FR  ++R + ++P  +T NI
Sbjct: 141 NAVVYNDLFNVLIRQNKVVDAVVLFR-ELIRLR-YKPVTYTVNI 182


>ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 598

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/104 (34%), Positives = 65/104 (62%)
 Frame = +3

Query: 3   RVNMYDSAKLVYDYMKADRIVPNNSLVDYLISSFANAGKFKIAEGILIAKGELCNHREVV 182
           R N++ +AK+VYD+M+ D  +P+N L+ +L+ S+A  G+  ++  +L      CN+   V
Sbjct: 83  RSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSRELL--ADVQCNN-VGV 139

Query: 183 SPFVCNKFLSLLISRNQVDDAVMFFRGHVLRSKSFRPDNFTFNI 314
           +  V N   ++LI +N+V DAV+ FR  ++R + ++P  +T NI
Sbjct: 140 NAVVYNDLFNVLIRQNKVVDAVVLFR-ELIRLR-YKPVTYTVNI 181


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