BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030924
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]   100   2e-19
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop...    99   3e-19
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    98   6e-19
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    96   3e-18
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    96   3e-18

>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
          Length = 939

 Score =  100 bits (248), Expect = 2e-19
 Identities = 42/85 (49%), Positives = 62/85 (72%)
 Frame = +1

Query: 1   RRMIKPPTRFADSNFTAYVLLAAEDIDNSQPKDFREAITCKEKNKWLLAIQEELQSLEKN 180
           RR I+PP RF  ++  AY L   E++  ++PK++ EAI+CK+  KW+ A+QEE +SL KN
Sbjct: 428 RRSIRPPQRFGYNDMVAYSLSIGEELSCAEPKNYLEAISCKDSPKWMTAMQEEFESLLKN 487

Query: 181 HTWQIVSKPNKKKLIGCKWIFRKKV 255
            TWQ+V KP   K++GCKW+F+KK+
Sbjct: 488 GTWQLVDKPKGCKVVGCKWVFKKKL 512


>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1166

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 40/84 (47%), Positives = 60/84 (71%)
 Frame = +1

Query: 1   RRMIKPPTRFADSNFTAYVLLAAEDIDNSQPKDFREAITCKEKNKWLLAIQEELQSLEKN 180
           R  I+PP+RF D +F AY L  AED++  +PK + EA+   ++ +W  A++EE+ S +K+
Sbjct: 703 RSNIRPPSRFEDEDFVAYALATAEDLEEEEPKSYEEALKSSKRKQWENAMKEEMDSHKKS 762

Query: 181 HTWQIVSKPNKKKLIGCKWIFRKK 252
           HTW ++ KP K+KLIGCKWIF+ K
Sbjct: 763 HTWDLIEKPEKQKLIGCKWIFKLK 786


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 41/96 (42%), Positives = 65/96 (67%)
 Frame = +1

Query: 1    RRMIKPPTRFADSNFTAYVLLAAEDIDNSQPKDFREAITCKEKNKWLLAIQEELQSLEKN 180
            +R +KPP R+  +  TA+ L  AE+I + +PK ++EAI   E ++W+ AIQEE+ SL KN
Sbjct: 741  KRQVKPPKRYGQAEMTAFALSVAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLRKN 800

Query: 181  HTWQIVSKPNKKKLIGCKWIFRKKVEASKGGAIKYK 288
             TW++V+KP  +K++G KW+F++K       A +YK
Sbjct: 801  ETWELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYK 836


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/98 (44%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
 Frame = +1

Query: 1    RRMIKPPTRFAD-SNFTAYVLLAAEDID-NSQPKDFREAITCKEKNKWLLAIQEELQSLE 174
            +R IKPP R+ + +N  AY L  AE+I+ N++P  + EAI   + N+W+ A+ +E++SLE
Sbjct: 991  KRNIKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLE 1050

Query: 175  KNHTWQIVSKPNKKKLIGCKWIFRKKVEASKGGAIKYK 288
            KNHTW++V  P +KK I CKWIF++K   S     +YK
Sbjct: 1051 KNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYK 1088


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 38/93 (40%), Positives = 60/93 (64%)
 Frame = +1

Query: 10   IKPPTRFADSNFTAYVLLAAEDIDNSQPKDFREAITCKEKNKWLLAIQEELQSLEKNHTW 189
            ++PPTR+   +   Y L  AE++D S+P  ++EAI   +  KW  A+ +E++SL KN TW
Sbjct: 764  VRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTW 823

Query: 190  QIVSKPNKKKLIGCKWIFRKKVEASKGGAIKYK 288
             +V +P+ +K+I CKW+F+KK   S    +KYK
Sbjct: 824  DLVIQPSGRKIITCKWVFKKKEGISPAEGVKYK 856