BLASTX nr result

ID: Scutellaria23_contig00030917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030917
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinu...    88   6e-16
ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica...    79   5e-13
emb|CBI22072.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helica...    77   2e-12

>ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1229

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/67 (61%), Positives = 56/67 (83%)
 Frame = +1

Query: 154 QEDSSVSEATCIRVAQILEQFRMSDDKAYTFDNDLTNRERAAVHMLCKKMGMKSKSHGRG 333
           Q + +V+EAT IR++QILEQFR + D+ +TF+ +L+NRERA VH +CKK+GMKSKS GRG
Sbjct: 11  QGNPNVAEATRIRISQILEQFRAAKDQVFTFEANLSNRERAVVHEVCKKLGMKSKSTGRG 70

Query: 334 QQRRLSV 354
            QRR+S+
Sbjct: 71  HQRRVSI 77


>ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|222857018|gb|EEE94565.1|
           predicted protein [Populus trichocarpa]
          Length = 1195

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/67 (59%), Positives = 55/67 (82%)
 Frame = +1

Query: 154 QEDSSVSEATCIRVAQILEQFRMSDDKAYTFDNDLTNRERAAVHMLCKKMGMKSKSHGRG 333
           Q++  V+EAT IR+++ILE+FR + D+ YTF+ +L+N +RA VH +CKKMGMKSKS GRG
Sbjct: 12  QQNPRVAEATLIRISKILERFRAAPDQVYTFEANLSNYDRAVVHEVCKKMGMKSKSSGRG 71

Query: 334 QQRRLSV 354
            QRR+SV
Sbjct: 72  GQRRVSV 78


>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
           vinifera]
          Length = 1231

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/67 (53%), Positives = 51/67 (76%)
 Frame = +1

Query: 154 QEDSSVSEATCIRVAQILEQFRMSDDKAYTFDNDLTNRERAAVHMLCKKMGMKSKSHGRG 333
           Q +  V+E T IR+++ L++FR + ++ YTF+ +LTN ERA VH +C+KMGM SKS GRG
Sbjct: 14  QNNPGVAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVCRKMGMTSKSSGRG 73

Query: 334 QQRRLSV 354
            QRR+SV
Sbjct: 74  SQRRVSV 80


>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
          Length = 1190

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/67 (53%), Positives = 51/67 (76%)
 Frame = +1

Query: 154 QEDSSVSEATCIRVAQILEQFRMSDDKAYTFDNDLTNRERAAVHMLCKKMGMKSKSHGRG 333
           Q +  V+E T IR+++ L++FR + ++ YTF+ +LTN ERA VH +C+KMGM SKS GRG
Sbjct: 14  QNNPGVAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVCRKMGMTSKSSGRG 73

Query: 334 QQRRLSV 354
            QRR+SV
Sbjct: 74  SQRRVSV 80


>ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
           max]
          Length = 1162

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/67 (52%), Positives = 51/67 (76%)
 Frame = +1

Query: 154 QEDSSVSEATCIRVAQILEQFRMSDDKAYTFDNDLTNRERAAVHMLCKKMGMKSKSHGRG 333
           +++ +V E T IR++QILE FR S+D+ Y FD DL+N+ERA VH +  KMG +SKS+G G
Sbjct: 19  RQNPNVDEVTRIRISQILEHFRASNDEVYKFDADLSNQERALVHQMALKMGFRSKSYGLG 78

Query: 334 QQRRLSV 354
           ++RR+ V
Sbjct: 79  KERRVCV 85


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