BLASTX nr result

ID: Scutellaria23_contig00030887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030887
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   122   2e-26
ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arab...   114   1e-23
gb|AAC69858.1| RING-H2 finger protein RHX1a, partial [Arabidopsi...   112   2e-23
ref|NP_191581.1| E3 ubiquitin-protein ligase ATL4 [Arabidopsis t...   112   2e-23
emb|CBI16714.3| unnamed protein product [Vitis vinifera]              112   2e-23

>ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Vitis vinifera]
          Length = 342

 Score =  122 bits (307), Expect = 2e-26
 Identities = 65/125 (52%), Positives = 82/125 (65%), Gaps = 6/125 (4%)
 Frame = +3

Query: 75  YLLLRLLSKRFGRAFSAAADDVVMRYEVQNSNHQPYHVTSTDL--LESLPLFPFRSVK-- 242
           YLLLR LS+R      +  DDVV+     +       V+  DL  ++SLPLF F SV+  
Sbjct: 58  YLLLRYLSRRCSERLHS--DDVVLPPVDSDRRFSSRRVSPEDLSLIDSLPLFTFGSVRGR 115

Query: 243 --TNGGDCAVCLSRFEPNDQLRLLPLCCHAFHAACIDKWIVSNQTCPLCRSTVLPFGSDA 416
             ++ GDCAVCLS+FEP+DQLRLLP+CCHAFHA CID W+ SNQTCPLCRS +    +D 
Sbjct: 116 NSSSEGDCAVCLSKFEPHDQLRLLPICCHAFHARCIDTWLASNQTCPLCRSPIFATEADF 175

Query: 417 LDKIL 431
           +  IL
Sbjct: 176 MKAIL 180


>ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arabidopsis lyrata subsp.
           lyrata] gi|297324162|gb|EFH54583.1| hypothetical protein
           ARALYDRAFT_486491 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/84 (61%), Positives = 63/84 (75%), Gaps = 5/84 (5%)
 Frame = +3

Query: 195 TDLLESLPLFPFRSV-----KTNGGDCAVCLSRFEPNDQLRLLPLCCHAFHAACIDKWIV 359
           + +L+SLP+F F SV      TN GDCAVCLS+FEP +QLRLLPLCCHAFHA CID W+V
Sbjct: 92  SSVLDSLPIFKFSSVTRRSSSTNSGDCAVCLSKFEPEEQLRLLPLCCHAFHADCIDIWLV 151

Query: 360 SNQTCPLCRSTVLPFGSDALDKIL 431
           SNQTCPLCRS +    SD +  ++
Sbjct: 152 SNQTCPLCRSPLFASESDLMKSLV 175


>gb|AAC69858.1| RING-H2 finger protein RHX1a, partial [Arabidopsis thaliana]
          Length = 273

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 5/83 (6%)
 Frame = +3

Query: 195 TDLLESLPLFPFRSV-----KTNGGDCAVCLSRFEPNDQLRLLPLCCHAFHAACIDKWIV 359
           + +L+SLP+F F SV       N GDCAVCLS+FEP DQLRLLPLCCHAFHA CID W+V
Sbjct: 30  SSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLV 89

Query: 360 SNQTCPLCRSTVLPFGSDALDKI 428
           SNQTCPLCRS +    SD +  +
Sbjct: 90  SNQTCPLCRSPLFASESDLMKSL 112


>ref|NP_191581.1| E3 ubiquitin-protein ligase ATL4 [Arabidopsis thaliana]
           gi|68565314|sp|Q9LY41.1|ATL4_ARATH RecName: Full=E3
           ubiquitin-protein ligase ATL4; AltName: Full=Protein
           ARABIDOPSIS TOXICOS EN LEVADURA 4; Short=Protein ATL4;
           AltName: Full=RING-H2 finger protein ATL4; AltName:
           Full=RING-H2 finger protein RHX1a
           gi|7576198|emb|CAB87859.1| RING-H2 zinc finger protein
           ATL4 [Arabidopsis thaliana] gi|66865934|gb|AAY57601.1|
           RING finger family protein [Arabidopsis thaliana]
           gi|114050661|gb|ABI49480.1| At3g60220 [Arabidopsis
           thaliana] gi|332646504|gb|AEE80025.1| E3
           ubiquitin-protein ligase ATL4 [Arabidopsis thaliana]
          Length = 334

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 5/83 (6%)
 Frame = +3

Query: 195 TDLLESLPLFPFRSV-----KTNGGDCAVCLSRFEPNDQLRLLPLCCHAFHAACIDKWIV 359
           + +L+SLP+F F SV       N GDCAVCLS+FEP DQLRLLPLCCHAFHA CID W+V
Sbjct: 91  SSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLV 150

Query: 360 SNQTCPLCRSTVLPFGSDALDKI 428
           SNQTCPLCRS +    SD +  +
Sbjct: 151 SNQTCPLCRSPLFASESDLMKSL 173


>emb|CBI16714.3| unnamed protein product [Vitis vinifera]
          Length = 203

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
 Frame = +3

Query: 201 LLESLPLFPFRSVK----TNGGDCAVCLSRFEPNDQLRLLPLCCHAFHAACIDKWIVSNQ 368
           L++SLPLF F SV+    ++ GDCAVCLS+FEP+DQLRLLP+CCHAFHA CID W+ SNQ
Sbjct: 23  LIDSLPLFTFGSVRGRNSSSEGDCAVCLSKFEPHDQLRLLPICCHAFHARCIDTWLASNQ 82

Query: 369 TCPLCRSTVLPFGSDALDKIL 431
           TCPLCRS +    +D +  IL
Sbjct: 83  TCPLCRSPIFATEADFMKAIL 103


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