BLASTX nr result

ID: Scutellaria23_contig00030836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030836
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302937.1| predicted protein [Populus trichocarpa] gi|2...   130   3e-28
emb|CBI16128.3| unnamed protein product [Vitis vinifera]              119   6e-25
emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]   116   5e-24
ref|XP_002532847.1| pentatricopeptide repeat-containing protein,...   110   4e-22
ref|XP_002872617.1| pentatricopeptide repeat-containing protein ...   108   1e-21

>ref|XP_002302937.1| predicted protein [Populus trichocarpa] gi|222844663|gb|EEE82210.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  130 bits (327), Expect = 3e-28
 Identities = 68/135 (50%), Positives = 94/135 (69%), Gaps = 1/135 (0%)
 Frame = -1

Query: 409 FTSSTHQNLHHTHESVSIIIHHLLSFNLLSHAESLILQLLSGKITSPLFTIPSLLPYLTS 230
           F SS  Q   HTH S+S ++ HLL  + L HA+SLILQ+LS KI+SP FT+PSLL +LT 
Sbjct: 25  FNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLLHHLTQ 84

Query: 229 NTKHSSST-LVYETIINAHVKAELPGDRALLLFDEMIDKGFMPSAILLNTVLKGLIKGCD 53
           N   S +T L+YE+IINAH+K++L  D+AL+ F+EM+DKG +    + N++L  L++   
Sbjct: 85  NQNPSMTTALLYESIINAHLKSQLL-DKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNC 143

Query: 52  FEKAWWVFEKNKGRV 8
           FEKAW  F + K RV
Sbjct: 144 FEKAWLFFNELKERV 158


>emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  119 bits (298), Expect = 6e-25
 Identities = 67/138 (48%), Positives = 92/138 (66%), Gaps = 2/138 (1%)
 Frame = -1

Query: 409 FTSSTHQNLHHTHESVSIIIHHLLSFNLLSHAESLILQLLSGKITSPLFTIPSLLPYLTS 230
           FTSS  Q   HTH+S+S I+H L+S NL SH++SL+L+L+SG+I+S  FT  SL   LT 
Sbjct: 26  FTSSALQGFQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSSLFHELTQ 85

Query: 229 NTKHSSST--LVYETIINAHVKAELPGDRALLLFDEMIDKGFMPSAILLNTVLKGLIKGC 56
               S  T  L++E IINAHV+++LP ++AL  F++MI +G +P +   N +L  LIK  
Sbjct: 86  PHLDSFPTHVLIHEAIINAHVRSQLP-EQALFYFNQMIGRGLVPGSNTFNNLLILLIKSN 144

Query: 55  DFEKAWWVFEKNKGRVGL 2
            FEKAW VF + KG V L
Sbjct: 145 FFEKAWRVFNETKGNVKL 162


>emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  116 bits (290), Expect = 5e-24
 Identities = 66/138 (47%), Positives = 91/138 (65%), Gaps = 2/138 (1%)
 Frame = -1

Query: 409 FTSSTHQNLHHTHESVSIIIHHLLSFNLLSHAESLILQLLSGKITSPLFTIPSLLPYLTS 230
           FTSS  Q   HTH+S+S I+H L+S NL SH++SL+L+L+SG+I+S  FT  SL   LT 
Sbjct: 13  FTSSALQGXQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSSLFHELTQ 72

Query: 229 NTKHSSST--LVYETIINAHVKAELPGDRALLLFDEMIDKGFMPSAILLNTVLKGLIKGC 56
               S  T  L++E IINAHV+++LP ++AL   ++MI +G +P +   N +L  LIK  
Sbjct: 73  PHLDSFPTHVLIHEAIINAHVRSQLP-EQALFYXNQMIGRGLVPGSNTFNNLLILLIKSN 131

Query: 55  DFEKAWWVFEKNKGRVGL 2
            FEKAW VF + KG V L
Sbjct: 132 FFEKAWRVFNETKGNVKL 149


>ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527384|gb|EEF29525.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 505

 Score =  110 bits (274), Expect = 4e-22
 Identities = 60/139 (43%), Positives = 93/139 (66%), Gaps = 3/139 (2%)
 Frame = -1

Query: 409 FTSSTHQNLHHTHESVSIIIHHLLSFNLLSHAESLILQLLSGKITSPLFTIPSLLPYLT- 233
           F SS +Q ++ TH+SV  I+H+LL FNL S  +SL+LQ+LS +I+SP FT+ SLL  LT 
Sbjct: 13  FNSSINQGINPTHQSVFFIVHYLLKFNLKSEVQSLLLQILSNRISSPFFTVSSLLENLTE 72

Query: 232 --SNTKHSSSTLVYETIINAHVKAELPGDRALLLFDEMIDKGFMPSAILLNTVLKGLIKG 59
             S      S+L+YE+II+ ++++    + A+L F++M+DKG +    + NT+L  L+K 
Sbjct: 73  PISIPCPKISSLLYESIISVYIQSG-SIELAVLYFNQMVDKGLVFEPNIFNTLLDSLVKS 131

Query: 58  CDFEKAWWVFEKNKGRVGL 2
             FEK W+VF + KG++ L
Sbjct: 132 KCFEKLWFVFNEVKGKIEL 150


>ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297318454|gb|EFH48876.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 584

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/134 (42%), Positives = 85/134 (63%)
 Frame = -1

Query: 403 SSTHQNLHHTHESVSIIIHHLLSFNLLSHAESLILQLLSGKITSPLFTIPSLLPYLTSNT 224
           S       HTHES+SI++  LLS NL SHA+SL+LQ++SGKI S  FT  SLL YLT + 
Sbjct: 29  SPNFHGFQHTHESISILLRLLLSGNLYSHAQSLLLQVISGKIQSQFFTSSSLLHYLTESE 88

Query: 223 KHSSSTLVYETIINAHVKAELPGDRALLLFDEMIDKGFMPSAILLNTVLKGLIKGCDFEK 44
              + + +YE IINA+V+++   D ++  F+EM+DKGF+P +   N +L  ++    F +
Sbjct: 89  TSKTKSRLYEVIINAYVQSQ-SLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQ 147

Query: 43  AWWVFEKNKGRVGL 2
            W  F ++K +V L
Sbjct: 148 WWCFFNESKIKVVL 161


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