BLASTX nr result

ID: Scutellaria23_contig00030828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030828
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCK73154.1| coat protein, partial [Cauliflower mosaic virus]...   151   6e-35
emb|CCK73156.1| coat protein, partial [Cauliflower mosaic virus]      150   1e-34
emb|CCK73153.1| coat protein, partial [Cauliflower mosaic virus]      150   1e-34
emb|CCK73151.1| coat protein, partial [Cauliflower mosaic virus]...   150   1e-34
gb|AAA21735.1| capsid protein [Cauliflower mosaic virus]              150   1e-34

>emb|CCK73154.1| coat protein, partial [Cauliflower mosaic virus]
           gi|449713924|emb|CCK73155.1| coat protein, partial
           [Cauliflower mosaic virus]
          Length = 464

 Score =  151 bits (381), Expect = 6e-35
 Identities = 72/162 (44%), Positives = 104/162 (64%)
 Frame = +2

Query: 5   IKTTKWDRTVDPMDAVHLVMKVFYALFLGIDLYTNKEVELEKEIEAAKRNMVTMTICDIC 184
           I+ T+W+RT    D +  V+   Y +FLG++   NK  E  +E E AK  M  + +CDIC
Sbjct: 195 IRNTRWNRTTG--DIIEQVIDAMYTMFLGLNYSDNKVAEKIEEQEKAKIRMTKLQLCDIC 252

Query: 185 YLEQFTCEYEKNLYKIPPVDHPLYVDMYMDKLPLIGEKTKKEFKSHVDEKNHNMRYSLGL 364
           YLE+FTC+YEKN+YK    D P Y++ Y+ K+P+IGEK    F+    E N    YSLG 
Sbjct: 253 YLEEFTCDYEKNMYKTELADFPGYINQYLSKIPIIGEKALTRFR---HEANGTSTYSLGF 309

Query: 365 AIRVAKEQIGKICELNTLGKKLKKFNKRCCALSEQPNLVFGC 490
           A ++ KE++ KIC+L+   KKLKKFNK+CC++ E  ++ +GC
Sbjct: 310 AAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGE-ASVEYGC 350


>emb|CCK73156.1| coat protein, partial [Cauliflower mosaic virus]
          Length = 464

 Score =  150 bits (379), Expect = 1e-34
 Identities = 72/162 (44%), Positives = 104/162 (64%)
 Frame = +2

Query: 5   IKTTKWDRTVDPMDAVHLVMKVFYALFLGIDLYTNKEVELEKEIEAAKRNMVTMTICDIC 184
           I+ T+W+RT    D +  V+   Y +FLG++   NK  E  +E E AK  M  + +CDIC
Sbjct: 195 IRNTRWNRTTG--DIIEQVIDAMYTMFLGLNYSDNKVAEKIEEQEKAKIRMTKLQLCDIC 252

Query: 185 YLEQFTCEYEKNLYKIPPVDHPLYVDMYMDKLPLIGEKTKKEFKSHVDEKNHNMRYSLGL 364
           YLE+FTC+YEKN+YK    D P Y++ Y+ K+P+IGEK    F+    E N    YSLG 
Sbjct: 253 YLEEFTCDYEKNMYKTELADFPGYINQYLSKIPIIGEKALTRFR---HEANGTSIYSLGF 309

Query: 365 AIRVAKEQIGKICELNTLGKKLKKFNKRCCALSEQPNLVFGC 490
           A ++ KE++ KIC+L+   KKLKKFNK+CC++ E  ++ +GC
Sbjct: 310 AAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGE-ASVEYGC 350


>emb|CCK73153.1| coat protein, partial [Cauliflower mosaic virus]
          Length = 464

 Score =  150 bits (379), Expect = 1e-34
 Identities = 72/162 (44%), Positives = 104/162 (64%)
 Frame = +2

Query: 5   IKTTKWDRTVDPMDAVHLVMKVFYALFLGIDLYTNKEVELEKEIEAAKRNMVTMTICDIC 184
           I+ T+W+RT    D +  V+   Y +FLG++   NK  E  +E E AK  M  + +CDIC
Sbjct: 195 IRNTRWNRTTG--DIIEQVIDAMYTMFLGLNYSDNKVAEKIEEQEKAKIRMTKLQLCDIC 252

Query: 185 YLEQFTCEYEKNLYKIPPVDHPLYVDMYMDKLPLIGEKTKKEFKSHVDEKNHNMRYSLGL 364
           YLE+FTC+YEKN+YK    D P Y++ Y+ K+P+IGEK    F+    E N    YSLG 
Sbjct: 253 YLEEFTCDYEKNMYKTELADFPGYINQYLSKIPIIGEKALTRFR---HEANGTSIYSLGF 309

Query: 365 AIRVAKEQIGKICELNTLGKKLKKFNKRCCALSEQPNLVFGC 490
           A ++ KE++ KIC+L+   KKLKKFNK+CC++ E  ++ +GC
Sbjct: 310 AAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGE-ASVEYGC 350


>emb|CCK73151.1| coat protein, partial [Cauliflower mosaic virus]
           gi|449713918|emb|CCK73152.1| coat protein, partial
           [Cauliflower mosaic virus]
          Length = 464

 Score =  150 bits (379), Expect = 1e-34
 Identities = 72/162 (44%), Positives = 104/162 (64%)
 Frame = +2

Query: 5   IKTTKWDRTVDPMDAVHLVMKVFYALFLGIDLYTNKEVELEKEIEAAKRNMVTMTICDIC 184
           I+ T+W+RT    D +  V+   Y +FLG++   NK  E  +E E AK  M  + +CDIC
Sbjct: 195 IRNTRWNRTTG--DIIEQVIDAMYTMFLGLNYSDNKVAEKIEEQEKAKIRMTKLQLCDIC 252

Query: 185 YLEQFTCEYEKNLYKIPPVDHPLYVDMYMDKLPLIGEKTKKEFKSHVDEKNHNMRYSLGL 364
           YLE+FTC+YEKN+YK    D P Y++ Y+ K+P+IGEK    F+    E N    YSLG 
Sbjct: 253 YLEEFTCDYEKNMYKTELADFPGYINQYLSKIPIIGEKALTRFR---HEANGTSIYSLGF 309

Query: 365 AIRVAKEQIGKICELNTLGKKLKKFNKRCCALSEQPNLVFGC 490
           A ++ KE++ KIC+L+   KKLKKFNK+CC++ E  ++ +GC
Sbjct: 310 AAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGE-ASVEYGC 350


>gb|AAA21735.1| capsid protein [Cauliflower mosaic virus]
          Length = 489

 Score =  150 bits (379), Expect = 1e-34
 Identities = 76/170 (44%), Positives = 107/170 (62%)
 Frame = +2

Query: 5   IKTTKWDRTVDPMDAVHLVMKVFYALFLGIDLYTNKEVELEKEIEAAKRNMVTMTICDIC 184
           I+ T+W+RT    D +  V+   Y +FLG++   NK  E   E E AK  M  + +CDIC
Sbjct: 201 IRNTRWNRTTG--DIIEQVIDAMYTMFLGLNYSDNKVAEKIDEQEKAKIRMTKLQLCDIC 258

Query: 185 YLEQFTCEYEKNLYKIPPVDHPLYVDMYMDKLPLIGEKTKKEFKSHVDEKNHNMRYSLGL 364
           YLE+FTC+YEKN+YK    D P Y++ Y+ K+P+IGEK    F+    E N    YSLG 
Sbjct: 259 YLEEFTCDYEKNMYKTELADFPGYINQYLSKIPIIGEKALTRFR---HEANGTSIYSLGF 315

Query: 365 AIRVAKEQIGKICELNTLGKKLKKFNKRCCALSEQPNLVFGCDTKK*NTK 514
           A ++ KE++ KIC+L+   KKLKKFNK+CC++ E  +  +GC  KK +TK
Sbjct: 316 AAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGE-ASAEYGC--KKTSTK 362


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