BLASTX nr result

ID: Scutellaria23_contig00030750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030750
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]   130   1e-28
dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris]                124   1e-26
ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulg...    84   2e-14
gb|AFK46433.1| unknown [Lotus japonicus]                               52   2e-12

>emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]
          Length = 142

 Score =  130 bits (326), Expect = 1e-28
 Identities = 74/107 (69%), Positives = 79/107 (73%), Gaps = 1/107 (0%)
 Frame = +2

Query: 2   KKGLTKPGSLTNTNLI**KRTVFSVYFPRFRCYRGLY-AIDRIR*ISLQHRSSKGSRRPT 178
           KKGLT+PGSLTNTN+I  K  +F +  P     R L    D I   S QHRSSKGSRRPT
Sbjct: 37  KKGLTEPGSLTNTNIIE-KNCLFCILSPVPLLPRALRNRSDHIDIPSTQHRSSKGSRRPT 95

Query: 179 KVRKPGSFRKRIPIRRVHNCMDKLTLTRQFGIQFDIFLGRYREGVGM 319
           K RK GSFRK IPIRRVHN MDKLTLTRQFGI F IFLGRYREG+GM
Sbjct: 96  KARKSGSFRKWIPIRRVHNRMDKLTLTRQFGIHFGIFLGRYREGIGM 142


>dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris]
          Length = 174

 Score =  124 bits (310), Expect = 1e-26
 Identities = 74/113 (65%), Positives = 80/113 (70%), Gaps = 7/113 (6%)
 Frame = +2

Query: 2   KKGLTKPGSLTNTNLI**-----KRTVFSVYFPRFRCYRGLY-AIDRIR*ISLQHRSSKG 163
           KKGLT+PGSLTNTNLI       K  +F +  P     R L    + I   S QHRSSKG
Sbjct: 62  KKGLTEPGSLTNTNLIENTNIIEKNCLFCILSPVLLLPRALRNRSEHIDIPSTQHRSSKG 121

Query: 164 SRRPTKVRKPGSFRKRIPIRRVHNCMDKLTLTRQFG-IQFDIFLGRYREGVGM 319
           SRRPTK RKPGS RK IPIRRVHN MDKLTLTRQFG IQF IFLGRYR+G+GM
Sbjct: 122 SRRPTKARKPGSVRKWIPIRRVHNRMDKLTLTRQFGMIQFGIFLGRYRKGIGM 174


>ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435087|ref|YP_004222305.1| hypothetical
           protein BevumaM_p070 [Beta vulgaris subsp. maritima]
           gi|346683178|ref|YP_004842110.1| hypothetical protein
           BemaM_p065 [Beta macrocarpa] gi|9049278|dbj|BAA99288.1|
           orf114a [Beta vulgaris subsp. vulgaris]
           gi|317905640|emb|CBJ14041.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439820|emb|CBJ17532.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|345500096|emb|CBX24914.1| hypothetical protein [Beta
           macrocarpa] gi|384977899|emb|CBL54123.1| hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 114

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 48/86 (55%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
 Frame = -1

Query: 240 MQLCTLRIGIRFLKDPGFRTLVGLRDPFDDL-C*RDIYLIRSIA*SPR*QRNRGKYTEK- 67
           M+LCTLRIGI FL DPGFR LVGLRDPFDDL C   I +        R  +  G+  +K 
Sbjct: 1   MRLCTLRIGIHFLTDPGFRALVGLRDPFDDLCCVEGISICSDRLRKARGSKRTGESIQKR 60

Query: 66  ----TVLFYYIRLVLVSDPGLVSPFF 1
                +L + IRLVLVSDPG VSPFF
Sbjct: 61  QFFSIILVFSIRLVLVSDPGSVSPFF 86


>gb|AFK46433.1| unknown [Lotus japonicus]
          Length = 66

 Score = 52.4 bits (124), Expect(2) = 2e-12
 Identities = 27/32 (84%), Positives = 28/32 (87%)
 Frame = -2

Query: 146 VEGISI*SDRLRKARDSNGTGGSIQKRQFFSI 51
           VEGISI SDRLRKAR SNGTG SIQKRQF+ I
Sbjct: 31  VEGISIRSDRLRKARGSNGTGESIQKRQFYFI 62



 Score = 44.3 bits (103), Expect(2) = 2e-12
 Identities = 21/25 (84%), Positives = 21/25 (84%)
 Frame = -3

Query: 232 MHSSNRNPFSERSWLSYFGGSPRSF 158
           MH SNRNPFSERS LS FGGS RSF
Sbjct: 1   MHPSNRNPFSERSRLSCFGGSSRSF 25


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