BLASTX nr result

ID: Scutellaria23_contig00030666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030666
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containi...    85   5e-15
emb|CBI35666.3| unnamed protein product [Vitis vinifera]               85   5e-15
emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]    83   3e-14
ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11

>ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Vitis vinifera]
          Length = 835

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/71 (57%), Positives = 51/71 (71%)
 Frame = -1

Query: 215 SKSRTANFTKIPSWVSLKSNKIPLKDPSTQHGELENVHLVTLSKQDKLKEAHEFLLVMDR 36
           S S +ANF +IPSWVSLK +   +K    Q G+LEN+HLV+LSKQ KLKEAH+FL  MD 
Sbjct: 21  STSSSANFAQIPSWVSLKRSSSTIKTEKIQQGKLENLHLVSLSKQGKLKEAHDFLKEMDD 80

Query: 35  CDIPVAPQSYK 3
            D+ V P SY+
Sbjct: 81  ADVSVTPHSYQ 91


>emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/71 (57%), Positives = 51/71 (71%)
 Frame = -1

Query: 215 SKSRTANFTKIPSWVSLKSNKIPLKDPSTQHGELENVHLVTLSKQDKLKEAHEFLLVMDR 36
           S S +ANF +IPSWVSLK +   +K    Q G+LEN+HLV+LSKQ KLKEAH+FL  MD 
Sbjct: 21  STSSSANFAQIPSWVSLKRSSSTIKTEKIQQGKLENLHLVSLSKQGKLKEAHDFLKEMDD 80

Query: 35  CDIPVAPQSYK 3
            D+ V P SY+
Sbjct: 81  ADVSVTPHSYQ 91


>emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/71 (56%), Positives = 50/71 (70%)
 Frame = -1

Query: 215 SKSRTANFTKIPSWVSLKSNKIPLKDPSTQHGELENVHLVTLSKQDKLKEAHEFLLVMDR 36
           S S +ANF +IPSWVSLK +   +     Q G+LEN+HLV+LSKQ KLKEAH+FL  MD 
Sbjct: 21  STSSSANFAQIPSWVSLKRSSSTIXTEKIQQGKLENLHLVSLSKQGKLKEAHDFLKEMDD 80

Query: 35  CDIPVAPQSYK 3
            D+ V P SY+
Sbjct: 81  ADVSVTPHSYQ 91


>ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/74 (47%), Positives = 52/74 (70%)
 Frame = -1

Query: 224 DNFSKSRTANFTKIPSWVSLKSNKIPLKDPSTQHGELENVHLVTLSKQDKLKEAHEFLLV 45
           D  + +R ANF +IPSWVSLKS+   L+    Q G++EN+HL++L+KQ  L+E HEF+  
Sbjct: 23  DKNNDARHANFAQIPSWVSLKSSHSSLRTHQNQQGQVENLHLISLAKQGNLREVHEFIRN 82

Query: 44  MDRCDIPVAPQSYK 3
           MD+  I + P+SY+
Sbjct: 83  MDKVGISINPRSYE 96


>ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/69 (47%), Positives = 48/69 (69%)
 Frame = -1

Query: 209 SRTANFTKIPSWVSLKSNKIPLKDPSTQHGELENVHLVTLSKQDKLKEAHEFLLVMDRCD 30
           +R ANF +IPSWVSLKS     +    Q G++EN+HL++L+KQ KL++ HEF+  MD   
Sbjct: 16  ARHANFAQIPSWVSLKSTHSSFRTHQNQQGQVENLHLISLAKQGKLRQVHEFIRNMDIAG 75

Query: 29  IPVAPQSYK 3
           I + P+SY+
Sbjct: 76  ISINPRSYE 84


Top